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Title: Methods for inhibiting
HIV-1 infection
United States Patent: 7,060,273
Issued: June 13, 2006
Inventors: Olson; William
C. (Ossining, NY); Maddon; Paul J. (Scarsdale, NY)
Assignee: Progenics
Pharmaceuticals, Inc. (Tarrytown, NY)
Appl. No.: 116797
Filed: April 5, 2002
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Executive MBA in Pharmaceutical Management, U. Colorado
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Abstract
This invention provides a method of
reducing an HIV infected subject's HIV-1 viral load which comprises
administering to the subject an effective viral load reducing amount of an
antibody which (a) binds to a CCR5 chemokine receptor and (b) inhibits
fusion of HIV-1 to a CD4+CCR5+cell, so as to thereby reduce the subject's
HIV-1 viral load to 50% or less of the subject's HIV-1 viral load prior to
administering the antibody to the subject.
DETAILED DESCRIPTION
OF THE INVENTION
The plasmids CD4-IgG2-HC-pRcCMV and
CD4-kLC-pRcCMV were deposited pursuant to, and in satisfaction of, the
requirements of the Budapest Treaty on the International Recognition of
the Deposit of Microorganisms (the "Budapest Treaty") for the Purposes of
Patent Procedure with the American Type Culture Collection (ATCC), 10801
University Blvd, Manassas, Va. 20110-2209 under ATCC Accession Nos. 75193
and 75194, respectively. The plasmids were deposited with ATCC on Jan. 30,
1992. The plasmid designated pMA243 was similarly deposited in accordance
with the Budapest Treaty with ATCC under Accession No. 75626 on Dec. 16,
1993.
The murine hybridomas PA8, PA9, PA10, PA11, PA12 and PA14 were deposited
pursuant to, and in satisfaction of, the requirements of the Budapest
Treaty on the International Recognition of the Deposit of Microorganisms
(the "Budapest Treaty") for the Purposes of Patent Procedure with the
American Type Culture Collection (ATCC), 10801 University Blvd, Manassas,
Va. 20110-2209 under the following ATCC Accession Nos.: PA8 (ATCC No.
HB-12605), PA9 (ATCC No. HB-12606), PA10 (ATCC No. HB-12607), PA11 (ATCC
No. HB-12608), PA12 (ATCC No. HB-12609) and PA14 (ATCC No. HB-12610). The
hybridomas were deposited on Dec. 2, 1998.
This invention provides a method of reducing an HIV infected subject's
HIV-1 viral load which comprises administering to the subject an effective
viral load reducing amount of an antibody which (a) binds to a CCR5
chemokine receptor and (b) inhibits fusion of HIV-1 to a CD4+CCR5+ cell,
so as to thereby reduce the subject's HIV-1 viral load to 50% or less of
the subject's HIV-1 viral load prior to administering the antibody to the
subject.
In one embodiment, the antibody is a monoclonal antibody. In one
embodiment, the antibody includes but is not limited to PA8 (ATCC
Accession No. HB-12605), PA9 (ATCC Accession No. HB-12606), PA10 (ATCC
Accession No.HB-12607), PA11 (ATCC Accession No. HB-12608), PA12 (ATCC
Accession No. HB-12609), and PA14 (ATCC Accession No. HB-12610). In a
preferred embodiment, the antibody is PA14 (ATCC Accession No. HB-12610).
In one embodiment, the subject's HIV-1 viral load is reduced to 33% or
less of the subject's HIV-1 viral load prior to administering the antibody
to the subject.
In one embodiment, the subject's HIV-1 viral load is reduced to 10% or
less of the subject's HIV-1 viral load prior to administering the antibody
to the subject.
In one embodiment, the reduction of the subject's HIV-1 viral load is
sustained for a period of time. In one embodiment, the period of time is
at least one day. In one embodiment, the period of time is at least three
days. In one embodiment, the period of time is at least seven days.
In one embodiment, the effective amount of the antibody is between about 1
mg and about 50 mg per kg body weight of the subject. In one embodiment,
the effective amount of the antibody is between about 2 mg and about 40 mg
per kg body weight of the subject. In one embodiment, the effective amount
of the antibody is between about 3 mg and about 30 mg per kg body weight
of the subject. In one embodiment, the effective amount of the antibody is
between about 4 mg and about 20 mg per kg body weight of the subject. In
one embodiment, the effective amount of the antibody is between about 5 mg
and about 10 mg per kg body weight of the subject.
In one embodiment, the antibody is administered at least once per day. In
one embodiment, the antibody is administered daily. In one embodiment, the
antibody is administered every other day. In one embodiment, the antibody
is administered every 6 to 8 days. In one embodiment, the antibody is
administered weekly. The route of administration of the antibody includes
but is not limited to intravenous, subcutaneous, intramuscular,
intraperitoneal, oral and topical.
In one embodiment, the subject is a human being and the antibody is a
humanized antibody.
This invention provides a composition for inhibiting HIV-1 infection
comprising at least two compounds in synergistically effective amounts for
inhibiting HIV-1 infection, wherein at least one of the compounds prevents
with the productive interaction between HIV-1 and an HIV-1 fusion
co-receptor.
This invention also provides a composition which inhibits fusion of HIV-1
or an HIV-1 envelope glycoprotein.sup.+ cell to a target cell, comprising
at least two compounds in synergistically effective amounts for inhibiting
fusion of HIV-1 or an HIV-1 envelope glycoprotein.sup.+ cell to a target
cell, wherein at least one of the compounds prevents the productive
interaction between HIV-1 and an HIV-1 fusion co-receptor.
As used herein, "chemokine" means a cytokine that can stimulate leukocyte
movement. They may be characterized as either cys-cys or cys-X-cys
depending on whether the two amino terminal cysteine residues are
immediately adjacent or separated by one amino acid. It includes but is
not limited to RANTES, MIP-1.alpha., MIP-1.beta., SDF-1 or another
chemokine which blocks HIV-1 infection.
In one embodiment of the compositions described herein, the co-receptor is
a chemokine receptor. In the preferred embodiment of the above
compositions, the chemokine receptor is CCR5 or CXCR4. Several other
chemokine and related receptors are known to function as HIV coreceptors
including but not limited to CCR2, CCR3, CCR8, STRL33, GPR-15, CX3CR1 and
APJ (69).
As used herein, "chemokine receptor" means a member of a homologous family
of seven-transmembrane spanning cell surface proteins that bind chemokines.
As used herein, "CCR5" is a chemokine receptor which binds members of the
C-C group of chemokines and whose amino acid sequence comprises that
provided in Genbank Accession Number 1705896 and related polymorphic
variants. As used herein, "CXCR4" is a chemokine receptor which binds
members of the C-X-C group of chemokines and whose amino acid sequence
comprises that provided in Genbank Accession Number 400654 and related
polymorphic variants.
In one embodiment of the compositions described herein, at least one of
the compounds is a nonpeptidyl molecule. In one embodiment, the
nonpeptidyl molecule is the bicyclam compound AMD3100. (16).
As used herein, "nonpeptidyl molecule" means a molecule that does not
consist in its entirety of a linear sequence of amino acids linked by
peptide bonds. A nonpeptidyl molecule may, however, contain one or more
peptide bonds.
In one embodiment of the compositions described herein, at least one of
the compounds is an antibody. In one embodiment, the antibody is a
monoclonal antibody. In another embodiment, the antibody is a anti-chemokine
receptor antibody. In one embodiment, the antibody is an anti-CXCR4
antibody. In a further embodiment, the anti CXCR4 antibody is 12G5. (43).
In a preferred embodiment, the antibody is an anti-CCR5 antibody. The
anti-CCR5 antibody includes but is not limited to PA8, PA9, PA10, PA11,
PA12 , PA14 and 2D7. In this composition the compounds are in an
appropriate ratio. The ratio ranges from 1:1 to 1000:1.
The monoclonal antibodies PA8, PA9, PA10, PA11, PA12 and PA14 were
deposited pursuant to and in satisfaction of, the requirements of the
Budapest Treaty on the International Recognition of the Deposit of
Microorganisms for the Purposes of Patent Procedure with the American Type
Culture Collection (ATCC), 10801 University Boulevard, Manassas, Virginia
20110-2209 on Dec. 2, 1998 under the following Accession Nos.: ATCC
Accession No. HB-12605 (PA8), ATCC Accession No. HB-12606 (PA9), ATCC
Accession No.HB-12607 (PA10) , ATCC Accession No. HB-12608 (Pl1), ATCC
Accession No. HB-12609 (PA12 ) ATCC Accession No. HB-12610 (PA14 ).
In another embodiment of the compositions described herein, two or more of
the compounds are antibodies. In one embodiment of the invention, the
antibodies include but are not limited to PA8, PA9, PA10, PA11, PA12, PA14
and 2D7. In this composition the antibodies are in an appropriate ratio.
The ratio ranges from 1:1 to 50:1.
As used herein, "antibody" means an immunoglobulin molecule comprising two
heavy chains and two light chains and which recognizes an antigen. The
immunoglobulin molecule may derive from any of the commonly known classes,
including but not limited to IgA, secretory IgA, IgG and IgM. IgG
subclasses are also well known to those in the art and include but are not
limited to human IgGl, IgG2, IgG3 and IgG4. It includes, by way of
example, both naturally occurring and non-naturally occurring antibodies.
Specifically, "antibody" includes polyclonal and monoclonal antibodies,
and monovalent and divalent fragments thereof. Furthermore, "antibody"
includes chimeric antibodies, wholly synthetic antibodies, single chain
antibodies, and fragments thereof. Optionally, an antibody can be labeled
with a detectable marker. Detectable markers include, for example,
radioactive or fluorescent markers. The antibody may be a human or
nonhuman antibody. The nonhuman antibody may be humanized by recombinant
methods to reduce its immunogenicity in man. Methods for humanizing
antibodies are known to those skilled in the art. As used herein,
"monoclonal antibody," also designated as mAb, is used to describe
antibody molecules whose primary sequences are essentially identical and
which exhibit the same antigenic specificity. Monoclonal antibodies may be
produced by hybridoma, recombinant, transgenic or other techniques known
to one skilled in the art. As used herein, "anti-chemokine receptor
antibody" means an antibody which recognizes and binds to an epitope on a
chemokine receptor. As used herein, "anti-CCR5 antibody" means a
monoclonal antibody which recognizes and binds to an epitope on the CCR5
chemokine receptor.
As used herein, "appropriate ratio" means mass or molar ratios wherein the
compounds are synergistically effective.
In one embodiment of the compositions described herein, at least one
compound is a chemokine or chemokine derivative. The chemokines include
but are not limited to RANTES, MIP-1.alpha., MIP-1.beta., SDF-1 or a
combination thereof. In this composition, the compounds are in an
appropriate ratio. The chemokine derivatives include but are not limited
to Met-RANTES, AOP-RANTES, RANTES 9-68, or a combination thereof.
As used herein, "chemokine derivative" means a chemically modified
chemokine. The chemical modifications include but are not limited to amino
acid substitutions, additions or deletions, non-peptidyl additions or
oxidations. One skilled in the art will be able to make such derivatives.
In another embodiment of the compositions described herein, at least one
compound is an antibody and at least one compound is a chemokine or
chemokine derivative. In this composition, the compounds are in an
appropriate ratio. The ratio ranges from 100:1 to 1000:1.
In another embodiment of the compositions described herein, at least one
compound binds to the gp41 subunit of the HIV-1 envelope glycoprotein. In
one embodiment, at least one compound is the T-20 peptide inhibitor of
HIV-1 entry (70).
In another embodiment of the compositions described herein, at least one
of the compounds inhibits the attachment of HIV-1 to a target cell. In one
embodiment, at least one compound binds CD4. In one embodiment, at least
one compound is an HIV-1 envelope glycoprotein. In one embodiment, at
least one compound is an anti-CD4 antibody. In one embodiment, at least
one compound binds to the HIV-1 envelope glyoprotein. In one embodiment,
at least one compound is an antibody to the HIV-1 envelope glycoprotein.
In one embodiment, at least one compound is a CD4-based protein. In one
embodiment, at least one compound is CD4-IgG2.
In another embodiment of the compositions described herein, at least one
compound is an antibody and at least one compound binds to an HIV-1
envelope glycoprotein. In one embodiment, the compound is a CD4-based
protein. In one embodiment, the compound is CD4-IgG2. In this composition,
the compounds are in an appropriate ratio. The ratio ranges from 1:1 to
10:1. As used herein, "attachment" means the process that is mediated by
the binding of the HIV-1 envelope glycoprotein to the human CD4 receptor,
which is not a fusion co-receptor.
As used herein, "CD4" means the mature, native, membrane-bound CD4 protein
comprising a cytoplasmic domain, a hydrophobic transmembrane domain, and
an extracellular domain which binds to the HIV-1 gp120 envelope
glycoprotein.
As used herein, "HIV-1 envelope glycoprotein" means the HIV-1 encoded
protein which comprises the gp120 surface protein, the gp41 transmembrane
protein and oligomers and precursors thereof.
In one embodiment of the compositions described herein at least one of the
compounds comprises a polypeptide which binds to a CCR5 epitope. In one
embodiment, the epitope is located in the N-terminus, one of the three
extracellular loop regions or a combination thereof. In one embodiment,
the epitope is located in the N-terminus. The epitope can comprise N13 and
Y15 in the N-terminus. The epitope can comprise comprises Q4 in the
N-terminus. In another embodiment, the epitope includes residues in the
N-terminus and second extracellular loop. The epitope can comprise D2, Y3,
Q4,S7, P8 and N13 in the N-terminus and Y176 and T177 in the second
extracellular loop. The epitope can comprise D2, Y3, Q4, P8 and N13 in the
N-terminus and Y176 and T177 in the second extracellular loop. The epitope
can comprise D2 in the N-terminus and R168 and Y176 in the secona
extracellular loop. In one embodiment, the epitope is located in the
second extra cellular loop. The epitope can comprise Q170 and K171 in the
second extracellular loop. The epitope can comprise Q170 and E172 in the
second extra cellular loop.
As used herein, the following standard abbreviations are used throughout
the specification to indicate specific amino acids: A=ala=alanine; R=arg=arginine;
N=asn=asparagine D=asp=aspartic acid; C=cys=cysteine; Q=gln=glutamine; E=glu=glutamic
acid; G=gly=glycine; H=his=histidine; I=ile=isoleucine; L=l e u=l e u c i
n e; K=lys=lysine; M=met=methionine; F=phe=phenylalanine; P=pro=proline;
S=ser=serine; T=thr=threonine; W=trp=tryptophan; Y=tyr=tyrosine; and V=val=valine.
As used herein, "polypeptide" means two or more amino acids linked by a
peptide bond. As used herein, "epitope" means a portion of a molecule or
molecules that forms a surface for binding antibodies or other compounds.
The epitope may comprise contiguous or noncontiguous amino acids,
carbohydrate or other nonpeptidyl moities or oligomer-specific surfaces.
As used herein, "N-terminus" means the sequence of amino acids spanning
the initiating methionine and the first transmembrane region. As used
herein, "second extra cellular loop" means the sequence of amino acids
that span the fourth and fifth transmembrane regions and are presented on
the surface.
In one embodiment of the compositions described herein at least one of the
compounds comprises a light chain of an antibody. In another embodiment of
the above compositions at least one of the compounds comprises a heavy
chain of an antibody. In another embodiment of the above compositions at
least one of the compounds comprises the Fab portion of an antibody. In
another embodiment of the above compositions at least one of the compounds
comprises the variable domain of an antibody. In another embodiment, the
antibody is produced as a single polypeptide or "single chain" antibody
which comprises the heavy and light chain variable domains genetically
linked via an intervening sequence of amino acids. In another embodiment
of the above compositions at least one of the compounds comprises one or
more CDR portions of an antibody.
This invention provides a composition described herein and a
pharmaceutically acceptable carrier. Pharmaceutically acceptable carriers
are well known to those skilled in the art. Such pharmaceutically
acceptable carriers may include but are not limited to aqueous or
non-aqueous solutions, suspensions, and emulsions. Examples of non-aqueous
solvents are propylene glycol, polyethylene glycol, vegetable oils such as
olive oil, and injectable organic esters such as ethyl oleate. Aqueous
carriers include water, alcoholic/aqueous solutions, emulsions or
suspensions, saline and buffered media. Parenteral vehicles include sodium
chloride solution, Ringer's dextrose, dextrose and sodium chloride,
lactated Ringer's or fixed oils. Intravenous vehicles include fluid and
nutrient replenishers, electrolyte replenishers such as those based on
Ringer's dextrose, and the like. Preservatives and other additives may
also be present, such as, for example, antimicrobials, antioxidants,
chelating agents, inert gases and the like.
This invention provides a method of treating a subject afflicted with
HIV-1 which comprises administering to the subject an effective dose of a
composition described herein.
This invention provides a method of treating a subject afflicted with
HIV-1 which comprises administering to the subject an effective amount of
an antibody described herein so as to treat the subject. In one
embodiment, the antibody may be enough to decrease the subject's viral
load. In one embodiment, the antibody is an anti-CCR5 antibody described
herein.
As used herein, "subject" means any animal or artificially modified animal
capable of becoming HIV-infected. Artificially modified animals include,
but are not limited to, SCID mice with human immune systems. The animals
include but are not limited to mice, rats, dogs, guinea pigs, ferrets,
rabbits, and primates. In the preferred embodiment, the subject is a
human.
As used herein, "treating" means either slowing, stopping or reversing the
progression of an HIV-1 disorder. In the preferred embodiment, "treating"
means reversing the progression to the point of eliminating the disorder.
As used herein, "treating" also means the reduction of the number of viral
infections, reduction of the number of infectious viral particles,
reduction of the number of virally infected cells, or the amelioration of
symptoms associated with HIV-1. As used herein, "afflicted with HIV-1"
means that the subject has at least one cell which has been infected by
HIV-1.
The dose of the composition of the invention will vary depending on the
subject and upon the particular route of administration used. Dosages can
range from 0.1 to 100,000 .mu.g/kg. Based upon the composition, the dose
can be delivered continuously, such as by continuous pump, or at periodic
intervals. For example, on one or more separate occasions. Desired time
intervals of multiple doses of a particular composition can be determined
without undue experimentation by one skilled in the art.
As used herein, "effective dose" means an amount in sufficient quantities
to either treat the subject or prevent the subject from becoming HIV-1
infected. A person of ordinary skill in the art can perform simple
titration experiments to determine what amount is required to treat the
subject. As used herein, "contracting HIV-1" means becoming infected with
HIV-1, whose genetic information replicates in and/or incorporates into
the host cells.
This invention provides a method of preventing a subject from contracting
HIV-1 which comprises administering to the subject an effective dose of a
composition described herein.
This invention provides humanized forms of the antibodies described herein
As used herein, "humanized" describes antibodies wherein some, most or all
of the amino acids outside the CDR regions are replaced with corresponding
amino acids derived from human immunoglobulin molecules. In one embodiment
of the humanized forms of the antibodies, some, most or all of the amino
acids outside the CDR regions have been replaced with amino acids from
human immunoglobulin molecules but where some, most or all amino acids
within one or more CDR regions are unchanged. Small additions, deletions,
insertions, substitutions or modifications of amino acids are permissible
as long as they would not abrogate the ability of the antibody to bind a
given antigen. Suitable human immunoglobulin molecules would include IgG1,
IgG2, IgG3, IgG4, IgA and IgM molecules. A "humanized" antibody would
retain a similar antigenic specificity as the original antibody, i.e., in
the present invention, the ability to bind CCR5 .
One skilled in the art would know how to make the humanized antibodies of
the subject invention. Various publications, several of which are hereby
incorporated by reference into this application, also describe how to make
humanized antibodies. For example, the methods described in U.S. Pat. No.
4,816,567 (71) comprise the production of chimeric antibodies having a
variable region of one antibody and a constant region of another antibody.
U.S. Pat. No. 5,225,539 (72) describes another approach for the production
of a humanized antibody. This patent describes the use of recombinant DNA
technology to produce a humanized antibody wherein the CDRs of a variable
region of one immunoglobulin are replaced with the CDRs from an
immunoglobulin with a different specificity such that the humanized
antibody would recognize the desired target but would not be recognized in
a significant way by the human subject's immune system. Specifically, site
directed mutagenesis is used to graft the CDRs onto the framework.
Other approaches for humanizing an antibody are described in U.S. Pat.
Nos. 5,585,089 (73) and 5,693,761 go (74) and WO 90/07861 which describe
methods for producing humanized immunoglobulins. These have one or more
CDRs and possible additional amino acids from a donor immunoglobulin and a
framework region from an accepting human immunoglobulin. These patents
describe a method to increase the affinity of an antibody for the desired
antigen. Some amino acids in the framework are chosen to be the same as
the amino acids at those positions in the donor rather than in the
acceptor. Specifically, these patents describe the preparation of a
humanized antibody that binds to a receptor by combining the CDRs of a
mouse monoclonal antibody with human immunoglobulin framework and constant
regions. Human framework regions can be chosen to maximize homology with
the mouse sequence. A computer model can be used to identify amino acids
in the framework region which are likely to interact with the CDRs or the
specific antigen and then mouse amino acids can be used at these positions
to create the humanized antibody.
The above U.S. Pat. Nos. 5,585,089 and 5,693,761, and WO 90/07861 (75)
also propose four possible criteria which may used in designing the
humanized antibodies. The first proposal was that for an acceptor, use a
framework from a particular human immunoglobulin that is unusually
homologous to the donor immunoglobulin to be humanized, or use a consensus
framework from many human antibodies. The second proposal was that if an
amino acid in the framework of the human immunoglobulin is unusual and the
donor amino acid at that position is typical for human sequences, then the
donor amino acid rather than the acceptor may be selected. The third
proposal was that in the positions immediately adjacent to the 3 CDRs in
the humanized immunoglobulin chain, the donor amino acid rather than the
acceptor amino acid may be selected. The fourth proposal was to use the
donor amino acid reside at the framework positions at which the amino acid
is predicted to have a side chain atom within 3.ANG. of the CDRs in a
three dimensional model of the antibody and is predicted to be capable of
interacting with the CDRs. The above methods are merely illustrative of
some of the methods that one skilled in the art could employ to make
humanized antibodies.
This invention provides isolated nucleic acid molecules encoding these
anti-CCR5 monoclonal antibodies or their humanized versions. The nucleic
acid molecule can be RNA, DNA or cDNA. In one embodiment, the nucleic acid
molecule encodes the light chain. In one embodiment, the nucleic acid
molecule encodes the heavy chain. In one embodiment, the nucleic acid
encodes both the heavy and light chains. In one embodiment, one or more
nucleic acid molecules encode the Fab portion. In one embodiment, one or
more nucleic acid molecules encode CDR portions. In one embodiment, the
nucleic acid molecule encodes the variable domain.
This invention provides a composition which comprises an admixture of two
compounds, wherein: (a) one compound is an antibody or portion thereof
which binds to a CCR5 receptor; and (b) one compound retards gp41 from
adopting a conformation capable of mediating fusion of HIV-1 to a CD4+
cell by binding noncovalently to an epitope on a gp41 fusion intermediate;
wherein the relative mass ratio of the compounds in the admixture ranges
from about 100:1 to about 1:100, the composition being effective to
inhibit HIV-1 infection of the CD4+ cell.
This invention provides a composition which comprises an admixture of
three compounds, wherein: (a) one compound is an antibody or portion
thereof which binds to a CCR5 receptor; (b) one compound retards
attachment of HIV-1 to a CD4+ cell by retarding binding of HIV-1 gp120
envelope glycoprotein to CD4 on the surface of the CD4+ cell; and (c) one
compound retards gp41 from adopting a conformation capable of mediating
fusion of HIV-1 to a CD4+ cell by binding noncovalently to an epitope on a
gp41 fusion intermediate; wherein the relative mass ratio of any two of
the compounds in the admixture ranges from about 100:1 to about 1:100, the
composition being effective to inhibit HIV-1 infection of the CD4+ cell.
As used herein, "gp41 fusion intermediates" includes structures,
conformations, and oligomeric states that are preferentially and
transiently presented or exposed on the HIV-1 envelope glycoprotein gp41
during the process of HIV-1 env-mediated membrane fusion. These
intermediates may form upon interaction of HIV-1 with cellular receptors
or may be present in partially or fully occluded states on HIV-1 prior to
its interaction with cellular receptors. "gp41 fusion intermediates" do
not include fusogenic gp41 conformations that cannot provide targets for
therapeutic intervention.
The gp41 fusion intermediates may contain multiple epitopes that are
transiently exposed during fusion and can provide targets for therapeutic
intervention. As used herein, an "N-terminal gp41 epitope" may comprise
all or portions of the sequences from amino acid A541 to Q590. As used
herein, a "C-terminal gp41 epitope" may comprise all or portions of the
sequences from amino acid W628 to L663. These epitopes have the potential
to form coiled-coils of interacting alpha helical segments by virtue of
heptad (sequence of seven amino acids) repeats containing hydrophobic
amino acids at positions 1 and 4 of the heptad. The amino acid numbering
system is for the HxB2 isolate of HIV-1 (Genbank Protein Accession No.
AAB50262). Because of the sequence variability of HIV-1 envelope proteins,
the composition, size and precise location of such sequences may be
different for different viral isolates. The gp41 fusion intermediates may
also present other linear or conformational epitopes that are transiently
expressed during HIV-1 entry. An inhibitor may target multiple epitopes
present on gp41 fusion intermediates. Alternatively, separate inhibitors
may be used in combination to target one or more epitopes present on gp41
fusion intermediates.
As used herein, "fusogenic" means capable of mediating membrane fusion. As
used herein, "HIV-1 fusion coreceptor" means a cellular receptor that
mediates fusion between the target cell expressing the receptor and HIV-1
or an HIV-1 envelope glycoprotein.sup.+ cell. HIV-1 fusion co-receptors
include but are not limited to CCR5, CXCR4 and other chemokine receptors.
As used herein, "fusion" means the joining or union of the lipid bilayer
membranes found on mammalian cells or viruses such as HIV-1. This process
is distinguished from the attachment of HIV-1 to a target cell. Attachment
is mediated by the binding of the HIV-1 exterior glycoprotein to the human
CD4 receptor, which is not a fusion co-receptor.
As used herein, "retards" means that the amount is reduced. As used
herein, "attachment" means the process that is mediated by the binding of
the HIV-1 envelope glycoprotein to the human CD4 receptor, which is not a
fusion co-receptor. As used herein, "CD4" means the mature, native,
membrane-bound CD4 protein comprising a cytoplasmic domain, a hydrophobic
transmembrane domain, and an extracellular domain which binds to the HIV-1
gp120 envelope glycoprotein.
As used herein, "epitope" means a portion of a molecule or molecules that
form a surface for binding antibodies or other compounds. The epitope may
comprise contiguous or noncontiguous amino acids, carbohydrate or other
nonpeptidyl moities or oligomer-specific surfaces.
The compounds of the subject invention have shown to demonstrate a
synergistic effect. As used herein, "synergistic" means that the combined
effect of the compounds when used in combination is greater than their
additive effects when used individually.
In one embodiment of the composition of this invention, the compound which
retards attachment of HIV-1 to the CD4+ cell by retarding binding of HIV-1
gp120 envelope glycoprotein to CD4 on the surface of the CD4+ cell is a
CD4-based protein. As used herein, "CD4-based protein" means any protein
comprising at least one sequence of amino acid residues corresponding to
that portion of CD4 which is required for CD4 to form a complex with the
HIV-1 gp120 envelope glycoprotein. In one embodiment the CD4-based protein
is a CD4-immunoglobulin fusion protein. In one embodiment the
CD4-immunoglobulin fusion protein is CD4-IgG2, wherein the CD4-IgG2
comprises two heavy chains and two lights chains, wherein the heavy chains
are encoded by an expression vector designated CD4-IgG2HC-pRcCMV (ATCC
Accession No. 75193) and the light chains are encoded by an expression
vector designated CD4-kLC-pRcCMV (ATCC Accession No. 75194). As used
herein, CD4-IgG2 is also referred to as PRO 542.
In one embodiment of the composition of this invention, the compound which
retards attachment of HIV-1 to the CD4+ cell by retarding binding of HIV-1
gp120 envelope glycoprotein to CD4 on the surface of the CD4+ cell is a
protein, the amino acid sequence of which comprises that of a protein
found in HIV-1 as an envelope glycoprotein.
In one embodiment, the protein binds to an epitope of CD4 on the surface
of the CD4+ cell. In one embodiment the envelope glycoprotein is selected
from the group consisting of gp120, gp160, and gp140.
In one embodiment of the composition of this invention, the compound which
retards the attachment of HIV-1 to the CD4+ cell by retarding binding of
HIV-1 gp120 envelope glycoprotein to CD4 on the surface of the CD4+ cell
is an antibody or portion of an antibody. In one embodiment, the antibody
is a monoclonal antibody. In one embodiment, the monoclonal antibody is a
human, humanized or chimeric antibody. In one embodiment, the portion of
the antibody is a Fab fragment of the antibody. In one embodiment, the
portion of the antibody comprises the variable domain of the antibody. In
one embodiment, the portion of the antibody comprises a CDR portion of the
antibody. In one embodiment, the monoclonal antibody is an IgG, IgM, IgD,
IgA, or IgE monoclonal antibody.
As used herein, "antibody" means an immunoglobulin molecule comprising two
heavv chains and two light chains and which recognizes an antigen. The
immunoglobulin molecule may derive from any of the commonly known classes,
including but not limited to IgA, secretory IgA, IgG and IgM. IgG
subclasses are also well known to those in the art and include but are not
limited to human IgG1, IgG2, IgG3 and IgG4. It includes, by way of
example, both naturally occurring and non-naturally occurring antibodies.
Specifically, "antibody" includes polyclonal and monoclonal antibodies,
and monovalent and divalent fragments thereof. Furthermore, "antibody"
includes chimeric antibodies, wholly synthetic antibodies, single chain
antibodies, and fragments thereof. The antibody may be a human or nonhuman
antibody. A nonhuman antibody may be humanized by recombinant methods to
reduce its immunogenicity in man. Methods for humanizing antibodies are
known to those skilled in the art.
In one embodiment, the antibody binds to an HIV-1 envelope glycoprotein.
In one embodiment, the HIV-1 envelope glycoprotein is selected from the
group consisting of gp120 and gp160. In one embodiment, the HIV-1 envelope
glycoprotein is gp120 and the monoclonal antibody which binds to gp120 is
IgG1b12 or F105. IgG1b12 is listed as item #2640 in the NIH AIDS Research
and Reference Reagent Program Catalog. F105 is listed as item #857 in the
NIH AIDS Research and Reference Reagent Program Catalog. In one
embodiment, the antibody binds to an epitope of CD4 on the surface of the
CD4+ cell.
In one embodiment of the composition of this invention, the compound which
retards attachment of HIV-1 to the CD4+ cell by retarding binding of HIV-1
gp120 envelope glycoprotein to CD4 on the surface of the CD4+ cell is a
peptide. In one embodiment of the composition of this invention, the
compound which retards attachment of HIV-1 to the CD4+ cell by retarding
binding of HIV-1 gp120 envelope glycoprotein to CD4 on the surface of the
CD4+ cell is a nonpeptidyl agent. As used herein, "nonpeptidyl" means that
the agent does not consist in its entirety of a linear sequence of amino
acids linked by peptide bonds. A nonpeptidyl agent may, however, contain
one or more peptide bonds.
In one embodiment of the composition of this invention, the compound which
retards gp41 from adopting a conformation capable of mediating fusion of
HIV-1 to a CD4+ cell by binding noncovalently to an epitope on a gp41
fusion intermediate is an antibody. In one embodiment the antibody is a
monoclonal antibody. In one embodiment, the antibody is a polyclonal
antibody.
In one embodiment of the composition of this invention, the compound which
retards gp41 from adopting a conformation capable of mediating fusion of
HIV-1 to a CD4+ cell by binding noncovalently to an epitope on a gp41
fusion intermediate is a peptide.
In one embodiment of the composition of this invention, the compound which
retards gp41 from adopting a conformation capable of mediating fusion of
HIV-1 to a CD4+ cell by binding noncovalently to an epitope on a gp41
fusion intermediate is a fusion protein which comprises a peptide which
inicudes but is not limited to T-20 (SEQ ID NO: 1) , DP107 (SEQ ID NO: 2)
, N34 (SEQ ID NO: 3), C28 (SEQ ID NO: 4), and N34(L6)C28 (SEQ ID NO: 5).
In one embodiment the peptide is selected from the group consisting of
T-20 (SEQ ID NO: 1), DP107 (SEQ ID NO: 2), N34 (SEQ ID NO: 3), C28 (SEQ ID
NO: 4), and N34 (L6) C28 (SEQ ID NO: 5). In one embodiment, the peptide is
T-20 (SEQ ID NO: 1).
As used herein, "T-20" and "DP178" are used interchangeably to denote a
peptide having the following amino acid sequence:
YTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWF (SEQ ID NO: 1) and as described
[29,32]. DP107 has the following amino acid sequence:
NNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQ (SEQ ID NO: 2). N34 has the
following amino acid sequence: SGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQAR (SEQ ID
NO: 3). C28 has the following amino acid sequence:
WMEWDREINNYTSLIHSLIEESQNQQEK (SEQ ID NO: 4). N34 (L6) C28 has the
following amino acid sequence: SGIVQQQNNLLRAIEAQQHLLQLTVWGI
KQLQARSGGRGGWMEWDREINNYTSLI HSLIEESQNQQEK (SEQ ID NO: 5).
In one embodiment of the above composition, the peptide is a mutant
peptide which (1) consists of amino acids having a sequence identical to
that of a wildtype peptide selected from the group consisting of T-20 (SEQ
ID NO: 1), DP-107 (SEQ ID NO: 2), N34 (SEQ ID NO: 3), C28 (SEQ ID NO: 4),
and N34 (L6)C28 (SEQ ID NO: 5), except for an addition of at least one
glycine residue to a 5' end of the peptide, to a 3' end of the peptide, or
to both ends of the peptide and (2) retards gp41 from adopting a
conformation capable of mediating fusion of HIV-1 to a CD4+ cell by
binding noncovalently to an epitope on a gp41 fusion intermediate.
In one embodiment of the compnosition of this invention, the compound
which retards gp41 from adopting a conformation capable of mediating
fusion of HIV-1 to a CD4+ cell by binding noncovalently to an epitope on a
gp41 fusion intermediate is a non-peptidyl agent.
In one embodiment of the composition of this invention, the antibody which
binds to a CCR5 receptor includes but is not limited to PA8 (ATCC
Accession No. HB-12605), PA10 (ATCC Accession No.12607), PA11 (ATCC
Accession No. HB-12608) , PA12 (ATCC Accession No. HB-12609) , and PA14 (ATCC
Accession No. HB-12610) . In one embodiment, the antibody is a monoclonal
antibody. In one embodiment, the monoclonal antibody is a human, humanized
or chimeric antibody. In one embodiment, the portion of the antibody is a
Fab fragment of the antibody. In one embodiment, the portion of the
antibody comprises the variable domain of the antibody. In one embodiment,
the portion of the antibody comprises a CDR portion of the antibody. In
one embodiment, the monoclonal antibody is an IgG, IgM, IgD, IgA, or IgE
monoclonal antibody.
In one embodiment of the composition of this invention, the relative mass
ratio of each such compound in the admixture ranges from about 25:1 to
about 1:1. In one embodiment, the mass ratio is about 25:1. In one
embodiment, the mass ratio is about 5:1. In one embodiment, the mass ratio
is about 1:1.
In one embodiment of the composition of this invention, the composition is
admixed with a carrier. The carriers of the subject invention include but
are not limited to aerosol, intravenous, oral or topical carriers.
Pharmaceutically acceptable carriers are well known to those skilled in
the art. Such pharmaceutically acceptable carriers may include but are not
limited to aqueous or non-aqueous solutions, suspensions, and emulsions.
Examples of non-aqueous solvents are propylene glycol, polyethylene
glycol, vegetable oils such as olive oil, and injectable organic esters
such as ethyl oleate. Aqueous carriers include water, alcoholic/aqueous
solutions, emulsions or suspensions, saline and buffered media. Parenteral
vehicles include sodium chloride solution, Ringer's dextrose, dextrose and
sodium chloride, lactated Ringer's or fixed oils. Intravenous vehicles
include fluid and nutrient replenishers, electrolyte replenishers such as
those based on Ringer's dextrose, and the like. Preservatives and other
additives may also be present, such as, for example, antimicrobials,
antioxidants, chelating agents, inert gases and the like.
This invention provides a method of inhibiting HIV-1 infection of a CD4+
cell which comprises contacting the CD4+ cell with an amount of the
composition of the subject invention effective to inhibit HIV-1 infection
of the CD4+ cell so as to thereby inhibit HIV-1 infection of the CD4+
cell.
In one embodiment, the CD4+ cell is present in a subject and the
contacting is effected by administering the composition to the subject.
As used herein, "subject" includes any animal or artificially modified
animal capable of becoming HIV-infected. Artificially modified animals
include, but are not limited to, SCID mice with human immune systems. The
animals include but are not limited to mice, rats, dogs, cats, guinea
pigs, ferrets, rabbits, and primates. In the preferred embodiment, the
subject is a human.
As used herein, "administering" may be effected or performed using any of
the methods known to one skilled in the art, which includes intralesional,
intraperitoneal, intramuscular, subcutaneous, intravenous, liposome
mediated delivery, transmucosal, intestinal, topical, nasal, oral, anal,
ocular or otic delivery. The compounds may be administered separately
(e.g., by different routes of administration, sites of injection, or
dosing schedules) so as to combine in synergistically effective amounts in
the subject.
The dose of the composition of the invention will vary depending on the
subject and upon the particular route of administration used. Dosages can
range from 0.1 to 100,000 .mu.g/kg. Based upon the composition, the dose
can be delivered continuously, such as by continuous pump, or at periodic
intervals. For example, on one or more separate occasions. Desired time
intervals of multiple doses of a particular composition can be determined
without undue experimentation by one skilled in the art.
As used herein, "effective dose" means an amount in sufficient quantities
to either treat the subject or prevent the subject from becoming infected
with HIV-1. A person of ordinary skill in the art can perform simple
titration experiments to determine what amount is required to treat the
subject.
In one embodiment, the effective amount of the composition comprises from
about 0.000001 mg/kg body weight to about 100 mg/kg body weight of the
subject.
This invention provides a method of inhibiting HIV-1 infection of a CD4+
cell which comprises contacting the CD4+ cell with (1) an amount of an
antibody which binds to a CCR5 receptor and (2) an amount of a compound
which retards gp41 from adopting a conformation capable of mediating
fusion of HIV-1 to a CD4+ cell by binding noncovalently to an epitope on a
gp41 fusion intermediate, so as to thereby inhibit HIV-1 infection of the
CD4+ cell.
This invention provides a method of inhibiting HIV-1 infection of a CD4+
cell which comprises contacting the CD4+ cell with (1) an amount of an
antibody which binds to a CCR5 receptor, (2) an amount of a compound which
retards attachment of HIV-1 to the CD4+ cell by retarding binding of HIV-1
gp120 envelope glycoprotein to CD4 on the surface of the CD4+ cell
effective to inhibit HIV-1 infection of the CD4+ cell, and (3) an amount
of a compound which retards gp41 from adopting a conformation capable of
mediating fusion of HIV-1 to a CD4+ cell by binding noncovalently to an
epitope on a gp41 fusion intermediate, so as to thereby inhibit HIV-1
infection of the CD4+ cell.
In one embodiment, the CD4+ cell is present in a subject and the
contacting is effected by administering the compounds to the subject. In
one embodiment, the compounds are administered to the subject
simultaneously. In one embodiment, the compounds are administered to the
subject at different times. In one embodiment, the compounds are
administered to the subject by different routes of administration.
The subject invention has various applications which includes HIV
treatment such as treating a subject who has become afflicted with HIV. As
used herein, "afflicted with HIV-1" means that the subject has at least
one cell which has been infected by HIV-1 . As used herein, "treating"
means either slowing, stopping or reversing the progression of an HIV-1
disorder. In the preferred embodiment, "treating" means reversing the
progression to the point of eliminating the disorder. As used herein,
"treating" also means the reduction of the number of viral infections,
reduction of the number of infectious viral particles, reduction of the
number of virally infected cells, or the amelioration of symptoms
associated with HIV-1. Another application of the subject invention is to
prevent a subject from contracting HIV. As used herein, "contracting
HIV-1" means becoming infected with HIV-1, whose genetic information
replicates in and/or incorporates into the host cells. Another application
of the subject invention is to treat a subject who has become infected
with HIV-1. As used herein, "HIV-1 infection" means the introduction of
HIV-1 genetic information into a target cell, such as by fusion of the
target cell membrane with HIV-1 or an HIV-1 envelope glycoprotein.sup.+
cell. The target cell may be a bodily cell of a subject. In the preferred
embodiment, the target cell is a bodily cell from a human subject. Another
application of the subject invention is to inhibit HIV-1 infection. As
used herein, "inhibiting HIV-1 infection" means reducing the amount of
HIV-1 genetic information introduced into a target cell population as
compared to the amount that would be introduced without said composition.
Claim 1 of 24 Claims
1. A method of reducing HIV-1
viral load in an HIV-1 infected subject which comprises administering to the
subject solely post-infection an effective viral load-reducing amount of an
agent which comprises a CDR domain of an anit-CCR5 antibody, which agent is
monoclonal antibody PA14 (ATCC Accession No. HB-12610) or competes with PA14
for binding to an epitope on a human CCR5 chemokine receptor, so as to
thereby reduce the subject's HIV-1 viral load to 50% or less of the
subject's HIV-1 viral load prior to administration of any of the antibody to
the subject.
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