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Title: Regulatory elements for
delivery to the liver
United States Patent: 7,312,324
Issued: December 25, 2007
Inventors:
Souza; David W. (Waltham, MA), Armentano;
Donna (Belmont, MA), Wadsworth; Samuel C. (Shrewsbury, MA)
Assignee: Genzyme
Corporation (Cambridge, MA)
Appl. No.: 10/139,763
Filed: May 6, 2002
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Pharm/Biotech Jobs
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Abstract
The invention is directed to novel
combinations of liver specific enhancers and promoter elements for
achieving persistent transgene expression in the liver. The liver specific
enhancer elements may be derived from either the human serum albumin,
prothrombin, .alpha.-1microglobulin or aldolase genes in single copies or
in multimerized form linked to elements derived from the cytomegalovirus
intermediate early (CMV), .alpha.-1-antitrypsin or albumin promoters. In a
preferred embodiment of the invention, an adenoviral vector comprising a
liver specific enhancer/promoter combination operably linked to a
transgene is administered to recipient cells. In other embodiments of the
invention, adeno-associated viral vectors, retroviral vectors, lentiviral
vectors or a plasmid comprising the liver specific enhancer/promoter
combination linked to a transgene is administered to recipient cells. Also
within the scope of the invention are promoter elements derived from the
human prothrombin gene and the .beta.-fibrinogen gene.
Description of the
Invention
SUMMARY OF THE INVENTION
Accordingly, the present invention
provides improved regulatory elements that are useful for targeting
transgene expression to the liver. In preferred embodiments, the
regulatory elements comprise combinations of promoter and enhancer
elements that are able to direct transgene expression preferentially in
liver. In particular embodiments, the regulatory elements are used in
recombinant vectors, such as such as nonviral plasmid based vectors or
such as viral vectors, including adenovirus, adeno-associated virus,
retrovirus and lentivirus, including the human immunodeficiency [HIV]
virus. In other embodiments, the invention comprises recombinant vectors
useful for transgene expression, particularly for high and sustained
expression in the liver, such as viral vectors. The vectors comprise
combinations of a constitutive or high-expressing promoter and one or more
liver-specific enhancer elements.
Thus, the present invention comprises recombinant transgenes comprising
strong constitutive promoters and one or more liver-specific enhancer
elements. The transgenes may be used in recombinant vectors, such as
recombinant viral vectors, for targeting expression of the associated
coding DNA sequences preferentially in liver. In preferred embodiments,
the strong constitutive promoter is selected from the group comprising a
CMV promoter, a truncated CMV promoter, human serum albumin promoter and
.alpha.-1-antitrypsin promoter. In other preferred embodiments, the
promoter is a truncated CMV promoter from which binding sites for known
transcriptional repressors have been deleted.
In other embodiments, the liver-specific enhancer elements are selected
from the group consisting of human serum albumin [HSA] enhancers, human
prothrombin [HPrT] enhancers, .alpha.-1microglobulin enhancers and
intronic aldolase enhancers. One or more of these liver-specific enhancer
elements may be used in combination with the promoter. In one preferred
embodiment of the invention, one or more HSA enhancers are used in
combination with a promoter selected from the group consisting of a CMV
promoter or an HSA promoter. In another preferred embodiment, one or more
enhancer elements selected from the group consisting of human prothrombin
(HPrT) enhancers and .alpha.-1microglobulin (A1MB) enhancers are used in
combination with the CMV promoter. In yet another preferred embodiment,
the enhancer elements are selected from the group consisting of HPrT
enhancers and A1MB enhancers, and are used in combination with the
.alpha.-1-antitrypsin promoter.
The preferred embodiments of the present invention are recombinant viral
vectors, particularly adenoviral vectors. In the preferred embodiments,
the coding DNA sequence may encode a therapeutic protein that is most
effective when delivered to the liver. The adenoviral vectors may
comprise, in addition to the promoters and enhancers of the present
invention, one or more adenoviral genes in order to support the efficient
expression of the coding DNA sequence.
DETAILED DESCRIPTION OF THE INVENTION
The delivery of genes to the liver for therapeutic purposes has been
explored extensively. This includes investigation aimed at correction of
genetic diseases of the liver as well as systemic diseases that might be
corrected by using the liver as a depot for therapeutic protein
production. For this gene therapy approach to be feasible, expression of
the therapeutic gene must be long-lived and approach appropriate levels.
In several reports, the use of a variety of viral, non-viral, and liver
specific promoters as well as various enhancer/promoter combinations has
been explored in the context of adenoviral, AAV, retroviral and
plasmid-based vectors for gene expression in cultured cells and in vivo.
In many of these examples transgene expression was transient and/or not
sufficient to achieve therapeutic benefit. In the context of adenoviral
vectors, the CMV promoter and RSV promoter direct high levels of transgene
expression however the longevity of expression is dependent upon retention
of the adenoviral E4 region in the vector. The development of an
enhancer/promoter combination that can direct sustained and appropriate
levels of transgene expression in the context of a variety of vector
systems would therefore be of benefit.
Promoters which are suitable for the present invention may be any strong
constitutive promoter which is capable of promoting expression of an
associated coding DNA sequence in the liver. Such strong constitutive
promoters include the human and murine cytomegalovirus [CMV] promoter,
truncated CMV promoters, human serum albumin promoter [HAS] and
.alpha.-1-antitrypsin promoter. In a specific embodiment, the promoter
used is a truncated CMV promoter from which binding sites for known
transcriptional repressors have been deleted.
The liver-specific enhancer elements useful for the present invention may
be any liver-specific enhancer that is capable of enhancing
tissue-specific expression of an associated coding DNA sequence in the
liver. Such liver-specific enhancers include one or more human serum
albumin enhancers, human prothrombin enhancers, .alpha.-1 microglobulin
enhancers and an intronic aldolase enhancers. In preferred embodiments,
multiple enhancer elements may be combined in order to achieve higher
expression.
Among the preferred embodiments of the present invention are vectors
comprising one or more HSA enhancers in combination with either a CMV
promoter or an HSA promoter; one or more enhancer elements selected from
the group consisting of the human prothrombin (HPrT) enhancer and the
.alpha.-1microglobulin (A1MB) enhancer in combination with a CMV promoter;
and one or more enhancer elements selected from the group consisting of
HPrT enhancers and A1MB enhancers, in combination with an
.alpha.-1-antitrypsin promoter.
The strategy for achieving high and sustained levels of transgene
expression involves combining promoter elements that have the potential to
direct effective and sustained levels of expression with liver specific
enhancer elements that can further increase expression. The promoter
fragments preferred for use in the present invention include a truncated
version of the CMV promoter (mCMV, nucleotides -245 to -14), human serum
albumin promoter (-486 to +20) and .alpha.-1-antitrypsin promoter (-844 to
-44). The truncated CMV promoter is missing binding sites for known
transcriptional repressors and is thus a preferred version of this
promoter. The human serum albumin and the .alpha.-1-antitrypsin promoter
contain elements that direct basal yet liver specific expression. The
transcription factor binding sites in these promoter regions are depicted
in FIG. 1 (see Original Patent). The enhancer elements used here include
two HSA enhancers (HSA-1.7, nucleotides -1806 to -1737; HSA-6, nucleotides
-6081 to -6000), a human prothrombin enhancer (-940 to -860), an
.alpha.-1microglobulin enhancer (-2806 to -2659) and an intronic aldolase
enhancer (+1916 to +2329). Each of these enhancers has been shown to
greatly increase transgene expression when linked to a minimal promoter
and transcription factor binding sites in these enhancer elements is
depicted in FIG. 2 (see Original Patent). FIG. 3 (see Original Patent) is
a schematic representation of an initial series of enhancer/promoter
combinations. Group A indicates the combinations of the HSA enhancers that
were linked to either the mCMV or HSA promoter. Groups B and C represent
the combinations of either the human prothrombin (HPrT) or
.alpha.-1microglobulin (A1MB) enhancer linked to the mCMV promoter. Groups
D and E represent the combinations of either HPrT or A1MB linked to the
.alpha.-1-antitrypsin promoter.
Each of these enhancer/promoter combinations was linked to .alpha.-galactosidase
and was tested for activity in Hep3B cells by measuring the levels of
.alpha.-galactosidase in the supernatant medium following transient
transfection. As shown in FIG. 4 (see Original Patent), expression from
the mCMV promoter is reduced compared to the CMV promoter. However, the
combination of five copies of the HSA-1.7 enhancer with one copy of the
HSA-6 enhancer linked to the mCMV promoter yielded expression that was
higher than that obtained with the CMV promoter. The expression results
from constructs containing the HPrT enhancer are shown in FIG. 5 (see Original Patent).
Linkage of this enhancer to the mCMV promoter (Panel B) elevated
expression to near levels achieved with the CMV promoter but did not
exceed it. Expression from the .alpha.-l-antitrypsin promoter was rather
poor, however when two copies of the HPrT enhancer are added expression
from this combination exceeds that from the CMV promoter. The expression
results from constructs containing the A1MB enhancer are shown in FIG. 6 (see Original Patent).
Progressively increased expression is seen with increasing copy number of
this enhancer (up to eight copies) linked to the mCMV promoter (Panel C).
All copy combinations of this enhancer linked to the .alpha.-1-antitrypsin
promoter yielded expression levels comparable to that obtained with the
CMV promoter (Panel E). Representative candidates from each vector series
that yielded equivalent or higher levels of .alpha.-galactosidase
expression compared to the CMV promoter were retested in a single
experiment. As shown in FIG. 7 (see Original Patent), all
enhancer/promoter combinations yielded comparable expression with
expression from the HSA-1.7(5) HSA-6(1)mCMV and HPrT(2)A1AT promoters
being the highest. These results demonstrate that high levels of
expression are achievable by combining multiple copies of liver specific
enhancers with various promoter elements.
Claim 1 of 11 Claims
1. A recombinant DNA vector,
comprising a human serum albumin promoter and two human prothrombin
enhancers.
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