|
|
Title: Post-natal
administration of activity-dependent neurotrophic factor-derived
polypeptides for enhancing learning and memory
United States Patent: 7,427,598
Issued: September 23, 2008
Inventors: Spong; Catherine
Y. (Arlington, VA), Brenneman; Douglas (Lansdale, PA), Gozes; Illana (Ramat
Hasharon, IL)
Assignee: The United States
of Americas as represented by the Secretary of the Department of Health
and Human Services (Washington, DC), N/A (Tel Aviv, IL), Ramot at Tel-Aviv
University, Ltd.
Appl. No.: 10/296,849
Filed: May 31, 2001
PCT Filed: May 31, 2001
PCT No.: PCT/US01/17758
371(c)(1),(2),(4) Date:
November 27, 2002
PCT Pub. No.: WO01/92333
PCT Pub. Date: December 06,
2001
|
|
|
Training Courses --Pharm/Biotech/etc.
|
Abstract
The present invention provides methods
for improving performance (e.g. learning and/or memory) using (ADNF)
polypeptides, by treating the subject prenatally or postnatally with an
Activity Dependent Neurotrophic Factor (ADNF) polypeptide in an amount
sufficient to improve postnatal learning and/or memory of the subject.
Description of the
Invention
Methods for Improving Performance
The present invention provides a method for improving performance (e.g.,
learning and/or memory) in a subject. The method comprises administering
to the subject, either prenatally or postnatally, an ADNF polypeptide in
an amount sufficient to improve post natal performance. In particular,
prenatal administration can improve spatial learning in a subject.
Candidate subjects who can benefit from such post or prenatal treatment,
ADNF polypeptides that can be administered, timing and modes of
administration, tests to assess improvement in learning and memory, and
methods for producing ADNF polypeptides are described in detail below.
Candidate Subjects for Treatment with ADNF Polypeptides
The prenatal and postnatal treatment with ADNF polypeptides has
applications in many types of subjects. For example, normal subjects can
benefit from the prenatal treatment of ADNF polypeptides in terms of
improving their learning and memory. A normal subject or a subject with
normal mental capacity refers to those whose intellectual functioning
level, even without the prenatal treatment with ADNF polypeptides, is
around or above average (e.g., having an IQ over 75). In the context of a
fetus, a normal subject can refer to a subject who does not appear to have
any mental impairment (e.g., according to an amniocentesis test) and/or
risk factors for mental retardation (e.g., family history of mental
retardation or a mother who consumed enough alcohol during pregnancy to
cause fetal alcohol syndrome in the subject). A mother who wishes her
unborn embryo or fetus to have enhanced capacity for learning and memory
can be administered with ADNF polypeptides while the embryo or fetus is in
utero.
Moreover, the present methods can benefit subjects whose mental ability is
compromised. For example, if a fetus is diagnosed as likely having mental
retardation or Down's syndrome, the fetus can be treated in utero with
ADNF polypeptides so that postnatal learning and memory can be
ameliorated. In a preferred embodiment, mental retardation is not caused
by maternal consumption of alcohol during pregnancy. In other words, a
candidate subject who has mental retardation does not have fetal alcohol
syndrome (which can include a condition of usually mild to moderate, but
occasionally severe, mental retardation or learning disabilities).
Severe mental retardation (defined as an IQ of 50 or less) often
originates from genetic disorders. These include, e.g., Down's syndrome,
fragile X syndrome, Klinefelter's syndrome, Prader-Willi syndrome and cri
du chat syndrome. Many of these conditions can be diagnosed with a
prenatal genetic test. For example, genetic disorders can be tested by an
amniocentesis test which is typically performed between 14 and 18 weeks of
pregnancy or by a chorionic villus sampling which is performed between 9
and 12 weeks of pregnancy. Prenatal treatment of the fetus with ADNF
polypeptides can benefit their postnatal learning and memory.
Even without a prenatal diagnosis of genetic disorders that cause mental
retardation, ADNF polypeptides can be prophylactically administered to the
fetus in certain circumstances. For example, if the subject has a family
history of mental retardation, the subject can be prenatally treated with
ADNF polypeptides. In another example, if the subject is at a higher risk
of being born with mental retardation due to infections such as rubella,
meningitis, CMV, etc., the subject can be prenatally treated with ADNF
polypeptides. In another example, the subject is at a higher risk of being
born with certain genetic disorders, such as Down's syndrome, when the
mother is older (e.g., 35 years or older). Prophylactic prenatal treatment
with ADNF polypeptides can ameliorate the subject's capacity for learning
and memory.
In other embodiments, the subject can be treated later in life, for
example, to improve short term learning and memory. For example, certain
memory and learning disorders, such as Alzheimer 's disease, may not be
apparent until later in life. Other conditions that can be treated using
postnatal administration of ADNF polypeptides include, neuropathology;
sensory-motor problems; improving the performance of subjects impaired in
cognitive tasks; improving the performance of subjects with memory
deficiencies; improving the performance of normal subjects; and the like.
Accordingly, embodiments of the invention in suitable formulations, can be
employed for decreasing the amount of time needed to learn a cognitive,
motor or perceptual task. Alternatively, invention compounds, in suitable
formulations, can be employed for increasing the time for which cognitive,
motor or perceptual tasks are retained. As another alternative,
embodiments of the invention in suitable formulations, can be employed for
decreasing the quantity and/or severity of errors made in recalling a
cognitive, motor or perceptual task. Such treatment may prove especially
advantageous in individuals who have suffered injury to the nervous
system, or who have endured disease of the nervous system. Moreover, ADNF
polypeptides can be administered to normal subjects to improve their
performance (e.g., learning and memory). ADNF polypeptides can be
particularly useful for an aged population in which capacity for memory
(e.g. short term) has generally declined.
ADNF Polypeptides
Any suitable ADNF polypeptides can be administered in embodiments of the
invention. For example, an ADNF polypeptide can be an ADNF I polypeptide,
an ADNF III polypeptide, or a mixture thereof In some embodiments, ADNF
polypeptides may comprise all L-amino acids, all D-amino acids, or a
combination thereof. When ADNF polypeptides are to be orally administered,
preferably an ADNF polypeptide comprises at least one D-amino acid within
its active core site, more preferably at the N-terminus and/or the
C-terminus of the active core site, and even more preferably at the entire
active core site or over the length of the molecule. Alternatively, the
D-amino acid can be at any suitable position in the polypeptide sequence.
Since D-enatiomers of polypeptides are enzymatically more stable than
their L-enatiomers, particularly in the gastrointestinal tract, an ADNF
polypeptide comprising D-amino acids are particularly useful for oral
administration.
In one aspect, the method comprises administering an ADNF I polypeptide
that comprises an active core site having the following amino acid
sequence: Ser-Ala-Leu-Leu-Arg-Ser-Ile-Pro-Ala (SEQ ID NO:1). In one
embodiment, the ADNF I polypeptide consists of an active core site that
has an amino acid sequence of Ser-Ala-Leu-Leu-Arg-Ser-Ile-Pro-Ala (SEQ ID
NO:1). In another embodiment, the ADNF I polypeptide can comprise
additional amino acids at the N-terminus and/or at the C-terminus of the
active core site. For example, the ADNF I polypeptide can comprise up to
40 amino acids at the N-terminus and/or the C-terminus of the active core
site. In another example, the ADNF I polypeptide can comprise up to 20
amino acids at the N-terminus and/or the C-terminus of the active core
site. In yet another example, the ADNF I polypeptide can comprise up to 10
amino acids at the N-terminus and/or the C- terminus of the active core
site. In yet another embodiment, the ADNF I polypeptide can be a fill
length ADNF I polypeptide.
In another aspect, the method comprises administering to the subject an
ADNF III polypeptide that comprises an active core site having the
following amino acid sequence: Asn-Ala-Pro-Val-Ser-Ile-Pro-Gln(SEQ ID
NO:2). In one embodiment, the ADNF I polypeptide consists of an active
core site that has an amino acid sequence of
Asn-Ala-Pro-Val-Ser-Ile-Pro-Gln(SEQ ID NO:2). In another embodiment, the
ADNF III polypeptide can comprise additional amino acids at the N-terminus
and/or at the C-terminus of the active core site. For example, the ADNF
III polypeptide can comprise up to 40 amino acids at the N-terminus and/or
the C- terminus of the active core site. In another example, the ADNF III
polypeptide can comprise up to 20 amino acids at the N-terminus and/or the
C-terminus of the active core site. In yet another example, the ADNF III
polypeptide can comprise up to 10 amino acids at the N-terminus and/or the
C-terminus of the active core site. In yet another embodiment, the ADNF
III polypeptide can be a full length ADNF III polypeptide.
In a preferred embodiment, the ADNF I polypeptide comprises an amino acid
sequence of
(R.sup.1).sub.x-Ser-Ala-Leu-Leu-Arg-Ser-Ile-Pro-Ala-(R.sup.2).sub.y (SEQ
ID NO:3), and the ADNF III polypeptide comprises an amino acid sequence of
(R.sup.3).sub.w-Asn-Ala-Pro-Val-Ser-Ile-Pro-Gln-(R.sup.4).sub.z (SEQ ID
NO:13).
In the above formula, each of R.sup.1, R.sup.2, R.sup.3, and R.sup.4, if
present, is an amino acid sequence comprising from 1 to about 40 amino
acids wherein each amino acid is independently selected. The term
"independently selected" is used herein to indicate that the amino acids
making up, for example, the amino acid sequence R.sup.1 may be identical
or different (e.g., all of the amino acids in the amino acid sequence may
be threonine, etc.). Moreover, as previously explained, the amino acids
making up the amino acid sequence R.sup.1 may be either naturally
occurring amino acids, or known analogues of natural amino acids that
functions in a manner similar to the naturally occurring amino acids
(i.e., amino acid mimetics). This discussion pertaining to R.sup.1 is
fully applicable to R.sup.2, R.sup.3, and R.sup.4.
Within the above formula for the ADNF I polypeptide, x and y are
independently selected and are equal to zero or one. The term
independently selected is used herein to indicate that x and y may be
identical or different. For example, x and y may both be zero or,
alternatively, x and y may both be one. In addition, x may be zero and y
may be one or, alternatively, x may be one and y may be zero. Moreover, if
x and y are both one, the amino acid sequences R.sup.1 and R.sup.2 may be
the same or different. As such, the amino acid sequences R.sup.1 and
R.sup.2 are independently selected. If R.sup.1 and R.sup.2 are the same,
they are identical in terms of both chain length and amino acid
composition. For example, both R.sup.1 and R.sup.2 may be Val-leu-Gly-Gly-Gly.
If R.sup.1 and R.sup.2 are different, they can differ from one another in
terms of chain length and/or amino acid composition and/or order of amino
acids in the amino acids sequences. For example, R.sup.1 may be Val-Leu-Gly-Gly-Gly
(SEQ ID NO:4), whereas R.sup.2 may be Val-Leu-Gly-Gly. (SEQ ID NO:5).
Alternatively, R.sup.1 may be Val-Leu-Gly-Gly-Gly(SEQ ID NO:4), whereas
R.sup.2 may be Val-Leu-Gly-Gly-Val (SEQ ID NO:6). Alternatively, R.sup.1
may be Val-Leu-Gly-Gly-Gly (SEQ ID NO:4), whereas R.sup.2 may be
Gly-Val-Leu-Gly-Gly(SEQ ID NO:7).
Similarly, w and z are independently selected and are equal to zero or one
within the above formula for the ADNF III polypeptide. The term
independently selected is used herein to indicate that w and z may be
identical or different. For example, w and z may both be zero or,
alternatively, w and z may both be one. In addition, w may be zero and z
may be one or, alternatively, w may be one and z may be zero. Moreover, if
w and z are both one, the amino acid sequences R.sup.3 and R.sup.4 may be
the same or different. As such, the amino acid sequences R.sup.3 and
R.sup.4 are independently selected. If R.sup.3 and R.sup.4 are the same,
they are identical in terms of both chain length and amino acid
composition. For example, both R.sup.3 and R.sup.4 may be
Leu-Gly-Leu-Gly-Gly (SEQ ID NO:8). If R.sup.3 and R.sup.4 are different,
they can differ from one another in terms of chain length and/or amino
acid composition and/or order of amino acids in the amino acids sequences.
For example, R.sup.3 may be Leu-Gly-Leu-Gly-Gly(SEQ ID NO:8), whereas
R.sup.4 may be Leu-Gly-Leu-Gly(SEQ ID NO:9). Alternatively, R.sup.3 may be
Leu-Gly-Leu-Gly-Gly (SEQ ID NO:8), whereas R.sup.4 may be
Leu-Gly-Leu-Gly-Leu (SEQ ID NO:10).
Within the scope, certain ADNF I and ADNF III polypeptides are preferred,
namely those in which x, y, w, and z are all zero (i.e., SALLRSIPA; SEQ ID
NO:1 and NAPVSIPQ; SEQ ID NO:2, respectively). Equally preferred are ADNF
I polypeptides in which x is one; R.sup.1 is Val-Leu-Gly-Gly-Gly (SEQ ID
NO:4; and y is zero. Also equally preferred are ADNF I polypeptides in
which x is one; R.sup.1 is Val-Glu-Glu-Gly-Ile-Val-Leu-Gly-Gly-Gly (SEQ ID
NO:11); and y is zero. Also equally preferred are ADNF III polypeptides in
which w is one; R.sup.3 is Gly-Gly; and z is zero. Also equally preferred
are ADNF III polypeptides in which w is one; R.sup.3 is Leu-Gly-Gly; z is
one; and R.sup.4 is Gln-Ser. Also equally preferred are ADNF III
polypeptides in which w is one; R.sup.3 is Leu-Gly-Leu-Gly-Gly-(SEQ ID
NO:8); z is one; and R.sup.4 is Gln-Ser. Also equally preferred are ADNF
III polypeptides in which w is one; R.sup.3 is Ser-Val-Arg-Leu-Gly-Leu-Gly-Gly
(SEQ ID NO:12); z is one; and R.sup.4 is Gln-Ser. Additional amino acids
can be added to both the N-terminus and the C-terminus of these active
sites (SALLRSIPA; SEQ ID NO:1 or NAPVSIPQ; SEQ ID NO:2) without loss of
biological activity as evidenced by the fact that the intact ADNF I or
ADNF III growth factors exhibit extraordinary biological activity. See,
U.S. Ser. No. 08/324,297, filed Oct. 17, 1994 (also published as
WO96/11948) for the description of ADNF I polypeptides; and U.S. Ser. No.
60/037,404 filed Feb. 27, 1997 and U.S. Ser. No. 60/059,621 filed, Sep.
23, 1997 (also published as WO98/35042) for the description of ADNF III
polypeptides, all of which are incorporated herein by reference.
In yet another aspect the method comprises administering to the subject a
mixture of an ADNF I polypeptide and an ADNF III polypeptide. Any one or
more of the ADNF I polypeptides described herein can be mixed with any one
or more of the ADNF III polypeptides described herein. A mixture of an
ADNF I polypepdde and an ADNF Ill polypeptide can be a blend of two or
more of these polypeptides. A mixture of an ADNF I polypeptide and an ADNF
III polypeptide can also refer to one or more of ADNF I polypeptides that
are coupled (directly or indirectly) to one or more of ADNF III
polypeptides. For example an ADNF I polypeptide can be covalently linked
to an ADNF III polypeptide. A mixture of ADNF I polypeptides and ADNF III
polypeptides can be prepared as a single composition and can be
administered to a subject. Alternatively, an ADNF I polypeptide and an
ADNF III polypeptide can be prepared as separate compositions. The
separate compositions can then be administered simultaneously or
sequentially to the subject. Furthermore, different proportions of an ADNF
I polypeptide and an ADNF III polypeptide can be administered to a
subject. For example, the subject can be administered with ADNF
polypeptides, wherein the ratio of an ADNF I polypeptide and an ADNF III
polypeptide can be in the range of 1:100 to 100:1, 1:10 to 10:1, or 1:2 to
2:1.
In yet another aspect, other ADNF polypeptide (including their alleles,
polymorphic variants, species homologs and subsequences thereof) can be
used to enhance performance.
Various parameters can be measured to determine if an ADNF polypeptide or
a mixture of ADNF polypeptides improves performance of a subject. For
example, the degree of learning deficits can be compared between the
control (e.g. untreated with ADNF polypeptides) and a group pretreated
with ADNF polypeptides. Learning deficits can be assessed using, for
example, a Morris water maze (see, e.g., the Example section). If any one
or more of these parameters are changed for the group treated with ADNF
polypeptides by, e.g., about 10%, optionally at least about 20%, at least
about 30%, at least about 40%, at least about 50%, at least about 60%, at
least about 70%, at least about 80%, at least about 90%, at least about
100%, at least about 150%, at least about 200%, etc., compared to control,
then these ADNF polypeptides can be advantageously used in the present
invention.
Administration and Pharmaceutical Compositions
ADNF polypeptides and nucleic acids encoding ADNF polypeptides can be
prenatally or postnatally administered to the subject using any suitable
methods known in the art. For example, ADNF polypeptides or nucleic acids
can be formulated as pharmaceutical compositions with a pharmaceutically
acceptable diluent, carrier or excipient. Suitable formulations for use in
the present invention are found in Remington 's Pharmaceutical Sciences
(17th ed. 1985)), which is incorporated herein by reference. A brief
review of methods for drug delivery is also described in, e.g., Langer,
Science 249:1527-1533 (1990), which is incorporated herein by reference.
In addition, the pharmaceutical compositions comprising peptides and
proteins are described in, e.g., Therapeutic Peptides and Proteins
Formulations, Processing, and Delivery Systems, by Banga, Technomic
Publishing Company, Inc., Lancaster, Pa. (1995).
In one embodiment, ADNF polypeptides are formulated for oral
administration, e.g., to the subject, or for prenatal administration, to
the subject 's mother. In this embodiment, it is preferred that ADNF
polypeptides comprising all D-amino acids are used. A pharmaceutically
acceptable nontoxic composition is formed by incorporating any of normally
employed excipients, and generally 10-95% of active ingredient and more
preferably at a concentration of 25%-75%. Furthermore, to improve oral
absorption of ADNF polypeptides, various carrier systems, such as
nanoparticles, microparticles, liposomes, phospholipids, emulsions,
erythrocytes, etc. can be used. The oral agents comprising ADNF
polypeptides of the invention can be in any suitable form for oral
administration, such as liquid, tablets, capsules, or the like. The oral
formulations can be further coated or treated to prevent or reduce
dissolution in stomach. See, e.g., Therapeutic Peptides and Proteins,
Formulation, Processing, and Delivery Systems, by A. K. Banga, Technomic
Publishing Company, Inc., 1995.
Furthermore, the ADNF polypeptides can be formulated for parenteral,
topical, nasal, sublingual, gavage, or local administration. For example,
the pharmaceutical compositions are administered parenterally, e.g.,
intravenously, subcutaneously, intradermally, or intramuscularly, or
intranasally. Thus, the invention provides compositions for parenteral
administration that comprise a solution of a mixture of ADNF polypeptides,
dissolved or suspended in an acceptable carrier, preferably an aqueous
carrier. A variety of aqueous carriers may be used including, for example,
water, buffered water, 0.4% saline, 0.3% glycine, hyaluronic acid and the
like. These compositions may be sterilized by conventional, well known
sterilization techniques, or they may be sterile filtered. The resulting
aqueous solutions may be packaged for use as is or lyophilized, the
lyophilized preparation being combined with a sterile solution prior to
administration. The compositions may contain pharmaceutically acceptable
auxiliary substances as required to approximate physiological conditions
including pH adjusting and buffering agents, tonicity adjusting agents,
wetting agents and the like, such as, for example, sodium acetate, sodium
lactate, sodium chloride, potassium chloride, calcium chloride, sorbitan
monolaurate, triethanolamine oleate, etc. In one embodiment, a nucleic
acid encoding an ADNF polypeptide is administered as a naked DNA.
For aerosol administration, ADNF polypeptides are preferably supplied in
finely divided form along with a surfactant and propellant. The surfactant
must, of course, be nontoxic, and preferably soluble in the propellant.
Representative of such agents are the esters or partial esters of fatty
acids containing from 6 to 22 carbon atoms, such as caproic, octanoic,
lauric, palmitic, stearic, linoleic, linolenic, olesteric and oleic acids
with an aliphatic polyhydric alcohol or its cyclic anhydride. Mixed
esters, such as mixed or natural glycerides may be employed. A carrier can
also be included, as desired, as with, e.g., lecithin for intrinasal
delivery.
For solid compositions, conventional nontoxic solid carriers may be used.
Solid carriers include, for example, pharmaceutical grades of mannitol,
lactose, starch, magnesium stearate, sodium saccharin, talcum, cellulose,
glucose, sucrose, magnesium carbonate, and the like.
The present invention also provides for therapeutic compositions or
medicaments comprising a mixture of one or more of the ADNF I and ADNF III
polypeptides described herein above in mixture with a pharmaceutically
acceptable excipient, wherein the amount of a mixture the ADNF I and ADNF
III polypeptide is sufficient to provide a desirable therapeutic effect.
Small polypeptides including SALLRSIPA (SEQ ID NO:1) and NAPVSIPQ (SEQ ID
NO:2) cross the blood brain barrier. For longer polypeptides that do not
the cross blood brain barrier, methods of administering proteins to the
brain are well known. For example, proteins, polypeptides, other compounds
and cells can be delivered to the mammalian brain via
intracerebroventricular (ICV) injection or via a cannula (see, e.g., Motta
& Martini, Proc. Soc. Exp. Biol. Med. 168:62-64 (1981); Peterson et al.,
Biochem. Pharamacol. 31:2807-2810 (1982); Rzepczynski et al., Metab. Brain
Dis. 3:211-216 (1988); Leibowitz et al., Brain Res. Bull. 21:905-912
(1988); Sramka et al., Stereotact. Funct. Neurosurg. 58:79-83 (1992); Peng
et al., Brain Res. 632:57-67 (1993); Chem et al., Exp. Neurol. 125:72-81
(1994); Nikkhah et al., Neuroscience 63:57-72 (1994); Anderson et al., J.
Comp. Neurol. 357:296-317 (1995); and Brecknell & Fawcett, Exp. Neurol.
138:338-344 (1996)). In particular, cannulas can be used to administer
neurotrophic factors to mammals (see, e.g., Motta & Martini, Proc. Soc.
Exp. Biol. Med. 168:62-64 (1981) (neurotensin); Peng et al., Brain Res.
632:57-67 (1993) (NGF); Anderson et al., J. Comp. Neurol. 357:296-317
(1995) (BDNF, NGF, neurotrophin-3).
Alternatively, longer ADNF polypeptides that do not cross blood brain
barrier can be coupled with a material which assists the ADNF polypeptide
to cross the blood brain barrier and to traverse the plasma membrane of a
cell, or the membrane of an intra-cellular compartment such as the
nucleus. Cellular membranes are composed of lipid-protein bilayers that
are freely permeable to small, nonionic lipophilic compounds and are
inherently impermeable to polar compounds, macromolecules, and therapeutic
or diagnostic agents. However, proteins and other compounds such as
liposomes have been described, which have the ability to translocate
polypeptides such as ADNF polypeptides across a cell membrane.
For example, "membrane translocation polypeptides" have amphiphilic or
hydrophobic amino acid subsequences that have the ability to act as
membrane-translocating carriers. In one embodiment, homeodomain proteins
have the ability to translocate across cell membranes. The shortest
internalizable peptide of a homeodomain protein, Antennapedia, was found
to be the third helix of the protein, from amino acid position 43 to 58
(see, e.g., Prochiantz, Current Opinion in Neurobiology 6:629-634 (1996)).
Another subsequence, the hydrophobic domain of signal peptides, was found
to have similar cell membrane translocation characteristics (see, e.g.,
Lin et al., J. Biol. Chem. 270:14255-14258 (1995)).
Examples of peptide sequences which can be linked to a ADNF polypeptide of
the invention, for facilitating uptake of ADNF polypeptides into cells,
include, but are not limited to: an 11 animo acid peptide of the tat
protein of HHV (see Schwarze et al., Science 285:1569-1572 (1999)); a 20
residue peptide sequence which corresponds to amino acids 84-103 of the
p16 protein (see Fahraeus et al., Current Biology 6:84 (1996)); the third
helix of the 60-amino acid long homeodomain of Antennapedia (Derossi et
al., J. Biol. Chem. 269:10444 (1994)); the h region of a signal peptide
such as the Kaposi fibroblast growth factor (K-FGF) h region (Lin et al.,
supra); or the VP22 translocation domain from HSV (Elliot & O'Hare, Cell
88:223-233 (1997)). Other suitable chemical moieties that provide enhanced
cellular uptake may also be chemically linked to ADNF polypeptides.
Toxin molecules also have the ability to transport polypeptides across
cell membranes. Often, such molecules are composed of at least two parts
(called "binary toxins"): a translocation or binding domain or polypeptide
and a separate toxin domain or polypeptide. Typically, the translocation
domain or polypeptide binds to a cellular receptor, and then the toxin is
transported into the cell. Several bacterial toxins, including Clostridium
perfringens iota toxin, diphtheria toxin (DT), Pseudomonas exotoxin A
(PE), pertussis toxin (PT), Bacillus anthracis toxin, and pertussis
adenylate cyclase (CYA), have been used in attempts to deliver peptides to
the cell cytosol as internal or amino-terminal fusions (Arora et al., J.
Biol. Chem., 268:3334-3341 (1993); Perelle et al., Infect. Immun.,
61:5147-5156 (1993); Stenmark et al., J. Cell Biol. 113:1025-1032 (1991);
Donnelly et al., Proc. Nat'l Acad. Sci. USA 90:3530-3534 (1993);
Carbonetti et al., Abstr. Annu. Meet. Am. Soc. Microbiol. 95:295 (1995);
Sebo et al., Infect. Immun. 63:3851-3857 (1995); Klimpel et al., Proc.
Nat'l Acad. Sci. USA 89:10277-10281 (1992); and Novak et al., J. Biol.
Chem. 267:17186-17193 1992)).
Such subsequences can be used to translocate ADNF polypeptides across a
cell membrane. ADNF polypeptides can be conveniently fused to or
derivatized with such sequences. Typically, the translocation sequence is
provided as part of a fusion protein. Optionally, a linker can be used to
link the ADNF polypeptides and the translocation sequence. Any suitable
linker can be used, e.g., a peptide linker.
The ADNF polypeptides and nucleic acids encoding ADNF polypeptides can
also be introduced into an animal cell, preferably a mammalian cell, via a
liposomes and liposome derivatives such as immunoliposomes and
lipid:nucleic acid complexes. The term "liposome" refers to vesicles
comprised of one or more concentrically ordered lipid bilayers, which
encapsulate an aqueous phase. The aqueous phase typically contains the
compound to be delivered to the cell, i.e., an ADNF polypeptide.
The liposome fuses with the plasma membrane, thereby releasing the ADNF
polypeptides into the cytosol. Alternatively, the liposome is phagocytosed
or taken up by the cell in a transport vesicle. Once in the endosome or
phagosome, the liposome either degrades or fuses with the membrane of the
transport vesicle and releases its contents.
In current methods of drug delivery via liposomes, the liposome ultimately
becomes permeable and releases the encapsulated compound (in this case, an
ADNF polypeptide) at the target tissue or cell. For systemic or tissue
specific delivery, this can be accomplished, for example, in a passive
manner wherein the liposome bilayer degrades over time through the action
of various agents in the body. Alternatively, active drug release involves
using an agent to induce a permeability change in the liposome vesicle.
Liposome membranes can be constructed so that they become destabilized
when the environment becomes acidic near the liposome membrane (see, e.g.,
Proc. Nat'l Acad. Sci. USA 84:7851 (1987); Biochemistry 28:908 (1989)).
When liposomes are endocytosed by a target cell, for example, they become
destabilized and release their contents. This destabilization is termed
fusogenesis. Dioleoylphosphatidylethanolamine (DOPE) is the basis of many
"fusogenic" systems.
Such liposomes typically comprise an ADNF polypeptide and a lipid
component, e.g., a neutral and/or cationic lipid, optionally including a
receptor-recognition molecule such as an antibody that binds to a
predetermined cell surface receptor or ligand (e.g., an antigen). A
variety of methods are available for preparing liposomes as described in,
e.g., Szoka et al., Ann. Rev. Biophys. Bioeng. 9:467 (1980), U.S. Pat.
Nos. 4,186,183, 4,217,344, 4,235,871, 4,261,975, 4,485,054, 4,501,728,
4,774,085, 4,837,028, 4,235,871, 4,261,975, 4,485,054, 4,501,728,
4,774,085, 4,837,028, 4,946,787, PCT Publication No. WO 91/17424, Deamer &
Bangham, Biochim. Biophys. Acta 443:629-634 (1976); Fraley, et al., Proc.
Nat'l Acad. Sci. USA 76:3348-3352 (1979); Hope et al., Biochim. Biophys.
Acta 812:55-65 (1985); Mayer et al., Biochim. Biophys. Acta 858:161-168
(1986); Williams et al., Proc. Nat'l Acad. Sci USA 85:242-246 (1988);
Liposomes (Ostro (ed.), 1983, Chapter 1); Hope et al., Chem. Phys. Lip.
40:89 (1986); Gregoriadis, Liposome Technology (1984) and Lasic, Liposomes:
from Physics to Applications (1993)). Suitable methods include, for
example, sonication, extrusion, high pressure/homogenization,
microfluidization, detergent dialysis, calcium-induced fusion of small
liposome vesicles and ether-fusion methods, all of which are well known in
the art.
In certain embodiments of the present invention, it is desirable to target
the liposomes of the invention using targeting moieties that are specific
to a particular cell type, tissue, and the like. Targeting of liposomes
using a variety of targeting moieties (e.g., ligands, receptors, and
monoclonal antibodies) has been previously described (see, e.g., U.S. Pat.
Nos. 4,957,773 and 4,603,044). Standard methods for coupling targeting
agents to liposomes can be used. These methods generally involve
incorporation into liposomes lipid components, e.g.,
phosphatidylethanoiamine, which can be activated for attachment of
targeting agents, or derivatized lipophilic compounds, such as lipid
derivatized bleomycin. Antibody targeted liposomes can be constructed
using, for instance, liposomes which incorporate protein A (see Renneisen
et al., J. Biol. Chem., 265:16337-16342 (1990) and Leonetti et al., Proc.
Nat'l Acad. Sci. USA 87:2448-2451 (1990).
Alternatively, nucleic acids encoding ADNF can also be used to provide a
therapeutic dose of ADNF polypeptides. These nucleic acids can be inserted
into any of a number of well-known vectors for the transfection of target
cells and organisms. For example, nucleic acids are delivered as DNA
plasmids, naked nucleic acid, and nucleic acid complexed with a delivery
vehicle such as a liposome. Viral vector delivery systems include DNA and
RNA viruses, which have either episomal or integrated genomes after
delivery to the cell. For a review of gene therapy procedures, see
Anderson, Science 256:808-813 (1992); Nabel & Felgner, TIBTECH 11:211-217
(1993); Mitani & Caskey, TIBTECH 11:162-166 (1993); Dillon, TIBTECH
11:167-175 (1993); Miller, Nature 357:455-460 (1992); Van Brunt,
Biotechnology 6(10):1149-1154 (1988); Vigne, Restorative Neurology and
Neuroscience 8:35-36 (1995); Kremer & Perricaudet, British Medical
Bulletin 51(1):31-44 (1995); Haddada et al., in Current Topics in
Microbiology and Immunology Doerfler and Bohm (eds) (1995); and Yu et al.,
Gene Therapy 1:13-26 (1994).
Methods of non-viral delivery of nucleic acids include lipofection,
microinjection, biolistics, virosomes, liposomes, immunoliposomes,
polycation or lipid:nucleic acid conjugates, naked DNA, artificial virions,
and agent-enhanced uptake of DNA. Lipofection is described in, e.g., U.S.
Pat. Nos. 5,049,386, 4,946,787; and 4,897,355) and lipofection reagents
are sold commercially (e.g., Transfectam.TM. and Lipofectin.TM.. Cationic
and neutral lipids that are suitable for efficient receptor-recognition
lipofection of polynucleotides include those of Felgner, WO 91/17424, WO
91/16024. Delivery can be to cells (ex vivo administration) or target
tissues (in vivo administration).
In therapeutic applications, a mixture of ADNF I and ADNF III polypeptides
of the invention are administered to a patient in an amount sufficient to
improve a subject's performance (e.g., learning and/or memory). An amount
adequate to accomplish this is defined as "therapeutically effective
dose." Amounts effective for this use will depend on, for example, the
particular ADNF I or ADNF III polypeptide employed, the manner of
administration, the weight and general state of health of the patient, and
the judgment of the prescribing physician. For example, for the
improvement of performance (e.g., learning and memory), an amount of ADNF
I or ADNF III polypeptides falling within the range of a 1 .mu.g to 50 .mu.g,
preferably 1 .mu.g to 10 .mu.g dose given intranasally once a day per
mouse (e.g., in the evening) would be a therapeutically effective amount.
This dose is based on the average body weight of a mouse. Therefore, an
appropriate dose can be extrapolated for a human body.
ADNF polypeptides can be prenatally administered to the subject directly
or indirectly through the subject's mother. ADNF polypeptides can be
administered at any time during the pregnancy. Preferably, ADNF
polypeptides are administered to the subject during the first trimester
(i.e., first 12 weeks) of the pregnancy when organs and the nervous system
of the subject are actively developing. More preferably, ADNF polypeptides
are administered during the time of neural tube development (which begins
around 22 days post-conception) and prior to its closure. ADNF
polypeptides can be administered as a single dose, preferably during the
critical period of neural tube development, or can be administered as
multiple doses throughout the pregnancy.
Tests for Measuring Improved Learning and/or Memory
Various parameters can be measured to determine if ADNF polypeptides
improve performance (e.g., learning and memory) in vivo. For example, the
hidden platform test of the Morris water maze, which is described in the
example section below, can be used to test spatial learning and memory.
Generally, mice that are treated with ADNF polypeptides and control mice
(that are not treated with ADNF polypeptides) are trained to escape the
swimming task by learning the position of a hidden platform and climbing
on it. The time it takes them to complete this task is defined as the
escape latency. This test can be conducted one or more times daily for a
number of days. One parameter that is indicative of improved learning and
memory is the reduction in latency in escaping the swimming task by
climbing onto the hidden platform (see the example section below). See,
also, methods described in Gozes et al., Proc. Natl. Acad. Sci. USA
93:427-432 (1996), incorporated herein by reference. Animals treated with
suitable ADNF polypeptides show improvement in their leaning and memory
capacities compared to the controls that are not treated with ADNF
polypeptides. Embodiments of the invention are not limited by examples of
the test used to measure performance. Any suitable test methods can be
used to measure performance, such as learning and memory.
Other methods known in the art can be used in human subjects to determine
if an ADNF polypeptide or a combination of ADNF polypeptides improves
performance (e.g., learning and memory) in vivo. For example, these
methods include assessment of memory or learning over time by the Randt
Memory Test (Randt et al., Clin. Neuropsychol., 1980, 2:184), Wechsler
Memory Scale (J. Psych. 19:87-95 (1945), Forward Digit Span test (Craik,
Age Differences in Human Memory, in: Handbook of the Psychology of Aging,
Birren, J., and Schaie, K. (Eds.), New York, Van Nostrand (1977),
Mini-Mental State Exam (Folstein et al., J. of Psych. Res. 12:189-192
(1975), or California Verbal Learning Test (CVLT). See, also, U.S. Pat.
No. 6,030,968. In these tests, factors unrelated to effects of ADNF
polypeptides (e.g., anxiety, fatigue, anger, depression, confusion, or
vigor) are controlled for. See, U.S. Pat. No. 5,063,206. Methods for
assessing and controlling for subjective factors is known in the art and
determined by such standard clinical tests such as the BECK Depression
Scale, Spielberger Trait State Anxiety test, and POMS test (Profile of
Mood State).
Spatial learning can also be tested in human. For example, a subject can
be asked to draw a picture, and then the picture is taken away. The
subject is then asked to draw the same picture from memory. The latter
picture drawn by the subject reflects a degree of spatial learning in the
subject.
Various parameters can be measured to determine if ADNF polypeptides
improve learning and memory of a subject. For example, the degree of
learning and memory improvement can be compared between the control (e.g.
untreated with ADNF polypeptides) and a group pretreated with ADNF
polypeptides. Learning and memory improvement can be assessed using, for
example, a Morris water maze for rodents (see, e.g., the Example section)
or any suitable tests such as those described above for humans. If any one
or more of these parameters are changed for the group treated with ADNF
polypeptides by, e.g., about 10%, optionally at least about 20%, at least
about 30%, at least about 40%, at least about 50%, at least about 60%, at
least about 70%, at least about 80%, at least about 90%, at least about
100%, at least about 150%, at least about 200%, etc., compared to control,
then it can be said that the ADNF polypeptides improved learning and
memory of the subject. Alternatively, statistical analysis using ANOVA for
continuous variables, Mann-Whitney U for nonparametic data, Chi square for
categorical variables or Fisher 's exact test with p<0.05 is considered
significant.
Methods for Production of ADNF Polypeptides
Recombinant Methods for Production of ADNF Polypeptides
Cloning and Isolation of ADNF Nucleic Acids
Several specific nucleic acids encoding ADNF polypeptides are described
herein. See, also, e.g., Brenneman & Gozes, J. Clin. Invest. 97:2299-2307
(1996), Brenneman, J. Pharm. Exp. Ther. 285:619-627 (1998), and Bassan et
al., J. Neurochem 72:1283-1293 (1999), the teachings of which are hereby
incorporated in their entirety by reference. These nucleic acids can be
made using standard recombinant or synthetic techniques. Given the nucleic
acids of the present invention, one of skill can construct a variety of
clones containing functionally equivalent nucleic acids, such as nucleic
acids that encode the same ADNF polypeptides. Cloning methodologies to
accomplish these ends, and sequencing methods to verify the sequence of
nucleic acids are well known in the art. Examples of appropriate cloning
and sequencing techniques, and instructions sufficient to direct persons
of skill through many cloning exercises are found in Sambrook et al.,
Molecular Cloning--A Laboratory Manual (2nd ed. 1989) and Current
Protocols in Molecular Biology (Ausubel et al., eds., 1994).
In addition, product information from manufacturers of biological reagents
and experimental equipment also provide information useful in known
biological methods. Such manufacturers include the SIGMA chemical company
(Saint Louis, Mo.), R&D systems (Minneapolis, Minn.), Pharmacia LKB
Biotechnology (Piscataway, N.J.), CLONTECH Laboratories, Inc. (Palo Alto,
Calif.), Chem Genes Corp., Aldrich Chemical Company (Milwaukee, Wis.),
Glen Research, Inc., GIBCO BRL Life Technologies, Inc. (Gaithersberg,
Md.), Fluka Chemica-Biochemika Analytika (Fluka Chemie AG, Buchs,
Switzerland), Invitrogen (San Diego, Calif.), and Applied Biosystems
(Foster City, Calif.), as well as many other commercial sources known to
one of skill.
The nucleic acid compositions of this invention, whether RNA, cDNA,
genomic DNA or a hybrid of the various mixtures, are isolated from
biological sources, such as astrocyte, neuroblastoma cells, or
fibroblasts, or synthesized in vitro. The nucleic acids of the invention
are present in transformed or transfected cells, in transformed or
transfected cell lysates, or in a partially purified or substantially pure
form.
In vitro amplification techniques suitable for amplifying sequences for
use as molecular probes or generating nucleic acid fragments for
subsequent subcloning are known. Examples of techniques sufficient to
direct persons of skill through such in vitro amplification methods,
including the polymerase chain reaction (PCR), the ligase chain reaction (LCR),
Q.beta.-replicase amplification and other RNA polymerase mediated
techniques (e.g., NASBA), are found in Berger, Sambrook et al. and Ausubel
et al., all supra, as well as in U.S. Pat. No. 4,683,202; PCR Protocols A
Guide to Methods and Applications (Innis et al., eds., 1990); Arnheim &
Levinson (Oct. 1, 1990) C&EN 36-47; The Journal Of NIH Research 3:81-94
(1991); Kwoh et al., Proc. Natl. Acad. Sci. USA 86:1173 (1989); Guatelli
et al., Proc. Natl. Acad. Sci. USA 87:1874 (1990); Lomell et al., J. Clin.
Chem 35:1826 (1989); Landegren et al., Science 241:1077-1080 (1988); Van
Brunt, Biotechnology 8:291-294 (1990); Wu & Wallace, Gene 4:560 (1989);
Barringer et al., Gene 89:117 (1990); and Sooknanan & Malek, Biotechnology
13:563-564 (1995). Improved methods of cloning in vitro amplified nucleic
acids are described in U.S. Pat. No. 5,426,039. Improved methods of
amplifying large nucleic acids are summarized in Cheng et al., Nature
369:684-685 (1994) and the references cited therein. One of skill will
appreciate that essentially any RNA can be converted into a double
stranded DNA suitable for restriction digestion, PCR expansion and
sequencing using reverse transcriptase and a polymerase.
Oligonucleotides for use as probes, for example, with in vitro ADNF
nucleic acid amplification methods, or for use as nucleic acid probes to
detect ADNF nucleic acids, are typically synthesized chemically according
to the solid phase phosphoramidite triester method described by Beaucage &
Caruthers, Tetrahedron Letts. 22(20):1859-1862 (1981), e.g., using an
automated synthesizer, e.g. as described in Needham-VanDevanter et al.,
Nucleic Acids Res. 12:6159-6168 (1984). Oligonucleotides can also be
custom made and ordered from a variety of commercial sources known to
those of skill in the art. Purification of oligonucleotides, where
necessary, is typically performed by either native acrylamide gel
electrophoresis, or by anion-exchange HPLC as described in Pearson &
Regnier, J. Chrom. 255:137-149 (1983). The sequence of the synthetic
oligonucleotides can be verified using the chemical degradation method of
Maxam & Gilbert, in Methods in Enzymology 65:499-560 (Grossman & Moldave,
eds., 1980).
One of skill will recognize many ways of generating alterations in a given
nucleic acid sequence. Such well-known methods include site-directed
mutagenesis, PCR amplification using degenerate oligonucleotides, exposure
of cells containing the nucleic acid to mutagenic agents or radiation,
chemical synthesis of a desired oligonucleotide (e.g., in conjunction with
ligation and/or cloning to generate large nucleic acids) and other
well-known techniques (see, Giliman & Smith, Gene 8:81-97 (1979); Roberts
et al., Nature 328:731-734 (1987); and Sambrook et al., Molecular
Cloning--A Laboratory Manual (2nd ed. 1989)).
Recombinant Expression of ADNF Polypeptides
In one embodiment, the polypeptides, or subsequences thereof, are
synthesized using recombinant nucleic acid methodology. Generally, this
involves creating a nucleic acid sequence that encodes the protein,
placing the nucleic acid in an expression cassette under the control of a
particular promoter, expressing the protein in a host cell, isolating the
expressed protein and, if required, renaturing the protein.
Once a nucleic acid encoding an ADNF polypeptide of the invention is
isolated and cloned, the nucleic acid is optionally expressed in
recombinantly engineered cells known to those of skill in the art.
Examples of such cells include, but are not limited to, bacteria, yeast,
plant, filamentous fungi, insect (especially employing baculoviral
vectors) and mammalian cells. The recombinant nucleic acids are operably
linked to appropriate control sequences for expression in the selected
host. For E. coli, example control sequences include the T7, trp, or
lambda promoters, a ribosome binding site and, preferably, a transcription
termination signal. For eukaryotic cells, the control sequences typically
include a promoter and, preferably, an enhancer derived from
immunoglobulin genes, SV40, cytomegalovirus, etc., and a polyadenylation
sequence, and may include splice donor and acceptor sequences.
If desired, recombinant nucleic acids can be constructed to encode a
fusion polypeptide comprising an ADNF polypeptide. For example, a nucleic
acid encoding an ADNF I polypeptide can be linked to a nucleic acid
encoding an ADNF III polypeptide to provide a mixture of ADNF
polypeptides. In another example, a nucleic acid encoding an ADNF
polypeptide (e.g., an ADNF I polypeptide, an ADNF III polypeptide, or a
fusion ADNF I/ADNF III polypeptide) can be linked with another nucleic
acid, such as a portion of HIV tat nucleic acid, which facilitates the
delivery of the ADNF III polypeptide into tissues. In yet another example,
a nucleic acid encoding an ADNF polypeptide can be linked to nucleic acids
that encode affinity tags to facilitate protein purification protocol. An
ADNF nucleic acid and a heterologous polynucleotide sequence can be
modified to facilitate their fusion and subsequent expression of fusion
polypeptides. For example, the 3' stop codon of the ADNF polynucleotide
sequence can be substituted with an in frame linker sequence, which may
provide restriction sites and/or cleavage sites.
The plasmids of the invention can be transferred into the chosen host cell
by well-known methods. Such methods include, for example, the calcium
chloride transformation method for E. coli and the calcium phosphate
treatment or electroporation methods for mammalian cells. Cells
transformed by the plasmids can be selected by resistance to antibiotics
conferred by genes contained on the plasmids, such as the amp, gpt, neo,
and hyg genes.
Once expressed, the recombinant ADNF polypeptides or naturally occurring
can be purified according to standard procedures of the art, including
ammonium sulfate precipitation, affinity columns, column chromatography,
gel electrophoresis and the like (see, e.g., Scopes, Polypeptide
Purification (1982); Deutscher, Methods in Enzynology Vol. 182: Guide to
Polypeptide Purification (1990)). Once purified, partially or to
homogeneity as desired, the ADNF polypeptides may then be used, e.g., to
improve learning and memory in a subject. See, also, e.g., Brenneman &
Gozes, J. Clin. Invest. 97:2299-2307 (1996), Brenneman et al., J. Pharm.
Exp. Ther. 285:619-627 (1998), and Bassan et al. J. Neurochem 72:1283-1293
(1999), the teachings of which are hereby incorporated in their entirety
by reference
Synthesis of ADNF Polypeptides
In addition to the foregoing recombinant techniques, the ADNF polypeptides
of the invention are optionally synthetically prepared via a wide variety
of well-known techniques. Polypeptides of relatively short size are
typically synthesized in solution or on a solid support in accordance with
conventional techniques (see, e.g., Merrifield, Am. Chem. Soc.
85:2149-2154 (1963)). Various automatic synthesizers and sequencers are
commercially available and can be used in accordance with known protocols
(see, e.g., Stewart & Young, Solid Phase Peptide Synthesis (2nd ed.
1984)). Solid phase synthesis in which the C-terminal amino acid of the
sequence is attached to an insoluble support followed by sequential
addition of the remaining amino acids in the sequence is the preferred
method for the chemical synthesis of the polypeptides of this invention.
Techniques for solid phase synthesis are described by Barany & Merrifield,
Solid-Phase Peptide Synthesis; pp. 3-284 in The Peptides: Analysis,
Synthesis, Biology. Vol. 2: Special Methods in Peptide Synthesis, Part A.;
Merrifield et al., J. Am. Chem. Soc. 85:2149-2156 (1963); and Stewart et
al., Solid Phase Peptide Synthesis (2nd ed. 1984).
After chemical synthesis, biological expression or purification, the
polypeptide(s) may possess a conformation substantially different than the
native conformations of the constituent polypeptides. In this case, it is
helpful to denature and reduce the polypeptide and then to cause the
polypeptide to re-fold into the preferred conformation. Methods of
reducing and denaturing polypeptides and inducing re-folding are well
known to those of skill in the art (see Debinsid et al., J. Biol. Chem.
268:14065-14070 (1993); Kreitman & Pastan, Bioconjug. Chem. 4:581-585
(1993); and Buchner et al., Anal. Biochem. 205:263-270 (1992)). Debinski
et al., for example, describe the denaturation and reduction of inclusion
body polypeptides in guanidine-DTE. The polypeptide is then refolded in a
redox buffer containing oxidized glutathione and L-arginine.
One of skill will recognize that modifications can be made to the
polypeptides without diminishing their biological activity. Some
modifications may be made to facilitate the cloning, expression, or
incorporation of the targeting molecule into a fusion polypeptide. Such
modifications are well known to those of skill in the art and include, for
example, a methionine added at the amino terminus to provide an initiation
site, or additional amino acids (e.g., poly His) placed on either terminus
to create conveniently located restriction sites or termination codons or
purification sequences.
Conservative Modifications of the ADNF Nucleic Acids and Polypeptides
One of skill will appreciate that many conservative variations of the ADNF
nucleic acid and polypeptide sequences provided herein yield functionally
identical products. For example, due to the degeneracy of the genetic
code, "silent substitutions" (i.e., substitutions of a nucleic acid
sequence that do not result in an alteration in an encoded polypeptide)
are an implied feature of every nucleic acid sequence that encodes an
amino acid. Similarly, "conservative amino acid substitutions," in one or
a few amino acids in an amino acid sequence are substituted with different
amino acids with highly similar properties (see the definitions section,
supra), are also readily identified as being highly similar to a disclosed
amino acid sequence, or to a disclosed nucleic acid sequence that encodes
an amino acid. Such conservatively substituted variations of each
explicitly listed nucleic acid and amino acid sequences are a feature of
the present invention.
One of skill will recognize many ways of generating alterations in a given
nucleic acid sequence. Such well-known methods include site-directed
mutagenesis, PCR amplification using degenerate oligonucleotides, exposure
of cells containing the nucleic acid to mutagenic agents or radiation,
chemical synthesis of a desired oligonucleotide (e.g., in conjunction with
ligation and/or cloning to generate large nucleic acids) and other
well-known techniques (see Giliman & Smith, Gene 8:81-97 (1979); Roberts
et al., Nature 328:731-734 (1987)). For example, alanine scanning can be
used to determine conservatively modified variants for SALLRSIPA (SEQ ID
NO:1) or NAPVSIPQ (SEQ ID NO:2) (i.e., by substituting each amino acid one
by one with an alanine or other small neutral amino acid and assay for
activity as described herein).
Polypeptide sequences can also be altered by changing the corresponding
nucleic acid sequence and expressing the polypeptide. Polypeptide
sequences are also optionally generated synthetically using commercially
available peptide synthesizers to produce any desired polypeptide (see,
Merrifield, supra, and Stewart & Young, supra).
More particularly, it will be readily apparent to those of ordinary skill
in the art that the ADNF polypeptides of the present invention can readily
be screened for their performance enhancing effect using various assays
(e.g., Morris watermaze assay).
Using these assays, one of ordinary skill in the art can readily prepare a
large number of ADNF polypeptides in accordance with the teachings of the
present invention and, in turn, screen them using the foregoing assay to
find ADNF polypeptides, in addition to those set forth herein, which
possess the neuroprotective/neurotrophic activity of the intact ADNF
growth factor. For instance, using ADNF III-8 (i.e.,
Asn-Ala-Pro-Val-Ser-Ile-Pro-Gln;(SEQ ID NO:2) as a starting point, one can
systematically add, for example, Gly-, Gly-Gly-, Leu-Gly-Gly- to the
N-terminus of ADNF III-8 and, in turn, screen each of these ADNF III
polypeptides in the foregoing assay to determine whether they possess
neuroprotective/neurotrophic activity. In doing so, it will be found that
additional amino acids can be added to both the N-terminus and the
C-terminus of the newly discovered active site, i.e.,
Asn-Ala-Pro-Val-Ser-Ile-Pro-Gln (SEQ ID NO:2), without loss of biological
activity as evidenced by the fact that the intact ADNF III growth factor
exhibits extraordinary biological activity. This discussion also applies
to ADNF I polypeptides.
Claim 1 of 22 Claims
1. A method for improving learning and
memory in a subject, the method comprising the step of administering
postnatally to the subject in an amount sufficient to improve postnatal
learning and memory of the subject, a mixture of: (a) an Activity
Dependent Neurotrophic Factor (ADNF) I polypeptide comprising an active
core site having the following amino acid sequence: Ser-Ala-Leu-Leu-Arg-Ser-Ile-Pro-Ala
(SEQ ID NO:1); and (b) an Activity Dependent Neurotrophic Factor (ADNF)
III polypeptide comprising an active core site having the following amino
acid sequence: Asn-Ala-Pro-Val-Ser-Ile-Pro-Gln (SEQ ID NO:2); and
assessing learning and memory of the post-natal subject, wherein the
active core site of at least one of the ADNF I polypeptide and the ADNF
III polypeptide comprises all D-amino acids. ____________________________________________
If you want to learn more
about this patent, please go directly to the U.S.
Patent and Trademark Office Web site to access the full
patent.
|