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Title:
Conjugate of an antibody against CCR5 and an antifusogenic peptide
United States Patent: 7,951,920
Issued: May 31, 2011
Inventors: Brandt; Michael
(Iffeldorf, DE), Fischer; Stephan (Polling, DE), Kopetzki; Erhard (Penzberg,
DE), Sankuratri; Suryanarayana (San Jose, CA), Schumacher; Ralf (Penzberg,
DE)
Assignee: Roche Palo Alto
LLC (Palo Alto, CA)
Appl. No.: 11/893,899
Filed: August 17, 2007
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Patheon
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Abstract
The current invention is related to a
conjugate comprising one or more antifusogenic peptides and an anti-CCR5
antibody (mAb CCR5) characterized in that one to eight antifusogenic
peptides are each conjugated to one terminus of the heavy and/or light
chains of the anti-CCR5 antibody and to the pharmaceutical use of the
conjugate.
Description of the
Invention
SUMMARY OF THE INVENTION
The invention comprises a conjugate comprising one or more antifusogenic
peptides and an anti-CCR5 antibody (mAb CCR5) characterized in that one to
eight antifusogenic peptides are each conjugated to one terminus of the
heavy and/or light chains of said anti-CCR5 antibody (a number of eight
antifusogenic peptides per mAb CCR5 is only possible if the mAb CCR5
comprises eight termini, i.e. is composed e.g. of two heavy chains and two
light chains; if the mAb CCR5 comprises a smaller number of C- and
N-termini, e.g. as a scFv, the corresponding number of antifusogenic
peptides possible at maximum in the conjugate is also reduced, i.e. it is
reduced to less than eight).
Preferably the carboxy-terminal amino acid of an anti-CCR5 antibody chain
is conjugated to the amino-terminal amino acid of the antifusogenic
peptide or the carboxy-terminal amino acid of the antifusogenic peptide is
conjugated to the amino-terminal amino acid of the antibody chain,
preferably by a peptide bond with or without an intermediate linker.
Preferably the conjugate is characterized by the general formula mAb
CCR5-[linker].sub.m-[antifusogenic peptide].sub.n wherein m is
independently for each antifusogenic peptide either 0 (i.e. a peptide bond
between mAb CCR5 and antifusogenic peptide) or 1 (i.e. a linker between
mAb CCR5 and antifusogenic peptide) and n is an integer of from 1 to 8.
A preferred conjugate of a heavy and/or light chain of mAb CCR5 and an
antifusogenic peptide ("chain conjugate") is selected from the group
consisting of: (1) [antifusogenic peptide]-[linker].sub.m-[heavy chain]
(2) [heavy chain]-[linker].sub.m-[antifusogenic peptide] (3) [antifusogenic
peptide]-[linker].sub.m-[heavy chain]-[antifusogenic peptide] (4) [antifusogenic
peptide]-[linker].sub.m-[light chain] (5) [light chain]-[linker].sub.m-[antifusogenic
peptide] (6) [antifusogenic peptide]-[linker].sub.m-[light chain]-[antifusogenic
peptide] (7) [antifusogenic peptide]-[linker].sub.m-[heavy chain]-[linker].sub.m-[antifusogenic
peptide] (8) [antifusogenic peptide]-[linker].sub.m-[light chain]-[linker].sub.m-[antifusogenic
peptide] wherein the linker can be the same or different in (within and
between) said chain conjugates, wherein m is an integer of 1 or 0, and m
can be independently the same or different in (within and between) said
chain conjugates.
("Left side" of the peptide or mAb CCR5 chain means N-terminus, "right
side" means C-terminus. In (1) therefore the C-terminus of the
antifusogenic peptide is linked by a peptide bond or a linker to the
N-terminus of the heavy chain of mAb CCR5).
Preferably the chain conjugates are assembled to conjugates according to
the invention comprising a mAb CCR5 (e.g. consisting of two light chains
and two heavy chains including the constant Fc domains, a scFv fragment,
or a Fab fragment).
Especially preferred chain conjugates are (2), (3), (4), and (7).
Especially preferred conjugates according to the invention comprise
2.times.[mAb CCR5 light chain] and 2.times.(2), 2.times.[mAb CCR5 light
chain] and 2.times.(3), or 2.times.[mAb CCR5 heavy chain] and 2.times.(4),
or 2.times.[mAb CCR5 light chain] and 2.times.(7). The heavy and/or light
chain comprises preferably a constant region (Fc).
Preferably the conjugate is characterized in comprising a variable heavy
chain domain consisting of an immunoglobulin framework and a CDR3 region
selected from the group consisting of the heavy chain CDR3 sequences SEQ
ID NO: 16, 17.
Preferably the conjugate is characterized in comprising a variable heavy
chain domain consisting of an immunoglobulin framework and a CDR3 region
selected from the group consisting of CDR3 sequences SEQ ID NO: 16, 17, a
CDR2 region selected from the group consisting of CDR2 sequences SEQ ID
NO: 13, 14, 15, and a CDR1 region selected from the group consisting of
CDR1 sequences SEQ ID NO: 9, 10, 11, 12.
Preferably the conjugate is characterized in comprising a heavy chain
variable domain selected from the group of heavy chain variable domains
comprising SEQ ID NO: 1, 3, 5, and 7.
Preferably the conjugate is characterized in comprising a variable light
chain domain consisting of an immunoglobulin framework and a CDR1 region
selected from SEQ ID NO:18, 19, 20, a CDR2 region selected from SEQ ID
NO:21, 22, 23, and a CDR3 region selected from SEQ ID NO:24, 25.
Preferably the conjugate is characterized in comprising as heavy chain
CDRs the CDRs of SEQ ID NO:1 and as light chain CDRs the CDRs of SEQ ID
NO:2, as heavy chain CDRs the CDRs of SEQ ID NO:3 and as light chain CDRs
the CDRs of SEQ ID NO:4, as heavy chain CDRs the CDRs of SEQ ID NO:5 and
as light chain CDRs the CDRs of SEQ ID NO:6, or as heavy chain CDRs the
CDRs of SEQ ID NO:7 and as light chain CDRs the CDRs of SEQ ID NO:8.
Preferably the conjugate is characterized in comprising a variable heavy
and light chain domain independently selected from the group consisting of
a) the heavy chain (V.sub.H) variable domain defined by amino acid
sequence SEQ ID NO: 1 and the light chain (V.sub.L) variable domain
defined by amino acid sequence SEQ ID NO:2; b) the heavy chain variable
domain defined by amino acid sequence SEQ ID NO:3 and the light chain
variable domain defined by amino acid sequence SEQ ID NO:4; c) the heavy
chain variable domain defined by amino acid sequence SEQ ID NO:5 and the
light chain variable domain defined by amino acid sequence SEQ ID NO:6; d)
the heavy chain variable domain defined by amino acid sequence SEQ ID NO:7
and the light chain variable domain defined by amino acid sequence SEQ ID
NO:8.
Preferably the conjugate is characterized in comprising the heavy chain (V.sub.H)
variable domain defined by amino acid sequence SEQ ID NO:1 and the light
chain (V.sub.L) variable domain defined by amino acid sequence SEQ ID
NO:2; or the heavy chain variable domain defined by amino acid sequence
SEQ ID NO:3 and the light chain variable domain defined by amino acid
sequence SEQ ID NO:4; or the heavy chain variable domain defined by amino
acid sequence SEQ ID NO:5 and the light chain variable domain defined by
amino acid sequence SEQ ID NO:6; or the heavy chain variable domain
defined by amino acid sequence SEQ ID NO:7 and the light chain variable
domain defined by amino acid sequence SEQ ID NO:8; a linker selected from
the group consisting of the amino acids glycine (G) and asparagine (N),
the tripeptide GST, and SEQ ID NO:36-62; and an antifusogenic peptide
selected from the group of peptides defined by SEQ ID NO:29 to 35.
Preferably the conjugate is characterized in comprising an antifusogenic
peptide selected from the group of peptides comprising C34, T20, T1249,
T651, T2635, N36, and DP107.
Preferably the conjugate is characterized in comprising an antifusogenic
peptide at each C-terminus of the heavy chains or at each N-terminus of
the light chains (two antifusogenic peptides). Preferably the conjugate is
characterized in that it comprises an antifusogenic peptide at each
C-terminus of the heavy chains and at each N-terminus of the light chains
(four antifusogenic peptides).
Preferably the conjugate is characterized in comprising two light chain
variable domains of SEQ ID NO:2, two conjugates of type (2) each
comprising a heavy chain variable domain of SEQ ID NO:1, a linker of SEQ
ID NO:40 and an antifusogenic peptide of SEQ ID NO:33, in comprising two
light chain variable domains of SEQ ID NO:4, two conjugates of type (2)
each comprising a heavy chain variable domain of SEQ ID NO:3, a linker of
SEQ ID NO:40 and an antifusogenic peptide of SEQ ID NO:33, in comprising
two light chain variable domains of SEQ ID NO:6, two conjugates of type
(2) each comprising a heavy chain variable domain of SEQ ID NO:5, a linker
of SEQ ID NO:40 and an antifusogenic peptide of SEQ ID NO:33, or in
comprising two light chain variable domains of SEQ ID NO:8, two conjugates
of type (2) each comprising a heavy chain variable domain of SEQ ID NO:7,
a linker of SEQ ID NO:40 and an antifusogenic peptide of SEQ ID NO:33.
Preferably the conjugate is characterized in that said anti-CCR5 antibody
is of IgG1 subclass. It is also preferred, that said anti-CCR5 antibody is
of IgG4 subclass, or of IgG1 or IgG2 subclass, with a mutation in amino
acid position S228, L234, L235, and/or D265, and/or contains the PVA236
mutation. Preferably the conjugate is characterized in that said anti-CCR5
antibody of IgG4 subclass has a S228P mutation and said anti-CCR5 antibody
of IgG1 subclass has L234A and L235A mutations.
The invention comprises a method for the production of a conjugate
according to the invention, characterized in that the method comprises a)
cultivating a cell containing one or more plasmids containing one or more
nucleic acid molecules encoding a conjugate according to the invention
under conditions suitable for the expression of the conjugate, b)
recovering the conjugate from the cell or the supernatant.
In one embodiment are the genes encoding the light and heavy chains of mAb
CCR5 with or without linked antifusogenic peptide located on the same
expression vector or on different expression vectors.
The invention comprises a pharmaceutical composition, containing a
conjugate according to the invention, together with a pharmaceutically
acceptable excipient or carrier.
The invention comprises the use of a conjugate according to the invention
for the manufacture of a medicament for the treatment of viral infections.
Preferably the use is characterized in that the viral infection is a HIV
infection.
The invention comprises the use of a conjugate according to the invention
for the treatment of a patient in need of an antiviral treatment,
preferably an anti HIV treatment.
DESCRIPTION OF THE INVENTION
The current invention reports a conjugate comprising one or more
antifusogenic peptides and an anti-CCR5 antibody (mAb CCR5) characterized
in that one to eight antifusogenic peptides are each conjugated to one
terminus of the heavy and/or light chains of said anti-CCR5 antibody. A
number of eight antifusogenic peptides per mAb CCR5 is only possible if
the mAb CCR5 comprises eight termini, i.e. is composed e.g. of two heavy
chains and two light chains. If the mAb CCR5 comprises a smaller number of
C- and N-termini, e.g. as a scFv, the corresponding number of
antifusogenic peptides possible at maximum in the conjugate is also
reduced, i.e. it is reduced to less than eight.
An "antifusogenic peptide" is a peptide which inhibits events associated
with membrane fusion or the membrane fusion event itself, including, among
other things, the inhibition of infection of uninfected cells by a virus
due to membrane fusion. These antifusogenic peptides are preferably linear
peptides. For example, they can be derived from the gp41 ectodomain, e.g.
such as DP107, DP178. Examples of such peptides can be found in U.S. Pat.
No. 5,464,933, U.S. Pat. No. 5,656,480, U.S. Pat. No. 6,013,263, U.S. Pat.
No. 6,017,536, U.S. Pat. No. 6,020,459, U.S. Pat. No. 6,093,794, U.S. Pat.
No. 6,060,065, U.S. Pat. No. 6,258,782, U.S. Pat. No. 6,348,568, U.S. Pat.
No. 6,479,055, U.S. Pat. No. 6,656,906, WO 1996/19495, WO 1996/40191, WO
1999/59615, WO 2000/69902, and WO 2005/067960. For example, the amino acid
sequences of such peptides comprise or can be selected from the group of
SEQ ID NO: 1 to 10 of U.S. Pat. No. 5,464,933; SEQ ID NO:1 to 15 of U.S.
Pat. No. 5,656,480; SEQ ID NO: 1 to 10 and 16 to 83 of U.S. Pat. No.
6,013,263; SEQ ID NO: 1 to 10, 20 to 83 and 139 to 149 of U.S. Pat. No.
6,017,536; SEQ ID NO:1 to 10, 17 to 83 and 210 to 214 of U.S. Pat. No.
6,093,794; SEQ ID NO:1 to 10, 16 to 83 and 210 to 211 of U.S. Pat. No.
6,060,065; SEQ ID NO:1286 and 1310 of U.S. Pat. No. 6,258,782; SEQ ID
NO:1129, 1278-1309, 1311 and 1433 of U.S. Pat. No. 6,348,568; SEQ ID NO:1
to 10 and 210 to 238 of U.S. Pat. No. 6,479,055; SEQ ID NO:1 to 171, 173
to 216, 218 to 219, 222 to 228, 231, 233 to 366, 372 to 398, 400 to 456,
458 to 498, 500 to 570, 572 to 620, 622 to 651, 653 to 736, 739 to 785,
787 to 811, 813 to 823, 825, 827 to 863, 865 to 875, 877 to 883, 885, 887
to 890, 892 to 981, 986 to 999, 1001 to 1003, 1006 to 1018, 1022 to 1024,
1026 to 1028, 1030 to 1032, 1037 to 1076, 1078 to 1079, 1082 to 1117, 1120
to 1176, 1179 to 1213, 1218 to 1223, 1227 to 1237, 1244 to 1245, 1256 to
1268, 1271 to 1275, 1277, 1345 to 1348, 1350 to 1362, 1364, 1366, 1368,
1370, 1372, 1374 to 1376, 1378 to 1379, 1381 to 1385, 1412 to 1417, 1421
to 1426, 1428 to 1430, 1432, 1439 to 1542, 1670 to 1682, 1684 to 1709,
1712 to 1719, 1721 to 1753, 1755 to 1757 of U.S. Pat. No. 6,656,906; or
SEQ ID NO:5 to 95 of WO 2005/067960. The antifusogenic peptide has an
amino acid sequence comprising of from 5 to 100 amino acids, preferably of
from 10 to 75 amino acids and more preferred of from 15 to 50 amino acids.
Especially preferred antifusogenic peptides are C-34, T-20, T-1249, T-651,
T-2635, N-36, (M. J. Root et al., Curr. Pharm. Des. (2004) 10:1805-25) and
DP-107 (C. Wild et al., Proc. Natl. Acad. Sci. USA (1994) 91:12676-80).
One embodiment comprises the conjugate according to the invention one or
more antifusogenic peptides and an anti-CCR5 antibody (mAb CCR5) wherein i)
said antifusogenic peptides are linear peptides with an amino acid
sequence of from 5 to 100 amino acids, and ii) one to eight antifusogenic
peptides are each conjugated to one terminus of the heavy and/or light
chains of said anti-CCR5 antibody. Another embodiment comprises the
conjugate according to the invention having one or more antifusogenic
peptides and an anti-CCR5 antibody (mAb CCR5) wherein i) said
antifusogenic peptides are derived from the gp41 ectodomain, and ii) one
to eight antifusogenic peptides are each conjugated to one terminus of the
heavy and/or light chains of said anti-CCR5 antibody. The term "gp41
ectodomain" denotes the amino acid sequence starting with amino acid
position 561 and ending with amino acid position 620 of HIV-1 gp 160 or
starting with amino acid position 50 and ending with amino acid position
109 of HIV-1 gp41 (SEQ ID NO:66) (see also e.g. S. Bar and M. J. Alizon,
Virol. (2004) 78:811-20).
The term "antibody" encompasses the various forms of antibody structures
including whole antibodies and antibody fragments. The antibody according
to the invention is preferably a human antibody, a humanized antibody, a
chimeric antibody, a T cell antigen depleted antibody (WO 98/33523, WO
98/52976, and WO 00/34317). Genetic engineering of antibodies is e.g.
described in S. L. Morrison et al., Proc. Natl. Acad. Sci. USA (1984)
81:6851-55; U.S. Pat. Nos. 5,202,238 and 5,204,244; L. Riechmann et al.,
Nature (1988) 332:323-27; M. S. Neuberger et al., Nature (1985)
314:268-70; N. Lonberg, Nat. Biotechnol. (2005) 23:1117-25.
"Antibody fragments" comprise a portion of a full length anti-CCR5
antibody, preferably the variable domains thereof or at least the antigen
binding portion thereof. Examples of anti-body fragments are e.g.
single-chain antibody molecules (scFv), Fab, F(ab).sub.2 fragments, and
the like as long as they retain the characteristics of an anti-CCR5
antibody. ScFv antibodies are, e.g., described in J. S. Huston, Meth.
Enzymol. (1991) 203:46-88. Huston also describes linkers and methods for
linking of polypeptides useful for the present invention.
"CCR5" means human CCR5 as described, e.g., in M. Oppermann, Cell Signal.
(2004) 16:1201-10 and SwissProt P51681. The terms "antibody binding to
CCR5", "anti-CCR5 antibody", or "mAb CCR5", which are used interchangeably
within this application, mean an antibody specifically binding to CCR5 and
preferably inhibiting HIV fusion with a target cell. Binding can be tested
in a cell based in vitro ELISA assay (CCR5 expressing CHO cells). Binding
is found if the antibody causes an S/N (signal/noise) ratio of 5 or more,
preferably 10 or more at an antibody concentration of 100 ng/ml. The term
"inhibiting HIV fusion with a target cell" refers to inhibiting HIV fusion
with a target cell measured in an assay comprising contacting said target
cell (e.g. PBMC) with the virus in the presence of the antibody in a
concentration effective to inhibit membrane fusion between the virus and
said cell and measuring e.g. luciferase reporter gene activity or the HIV
p24 antigen concentration. The term "membrane fusion" refers to fusion
between a first cell coexpressing CCR5 and CD4 polypeptides and a second
cell or virus expressing an HIV env protein. Membrane fusion is determined
by genetically engineered cells and/or viruses by a reporter gene assay
(e.g. by luciferase reporter gene assay).
Preferred anti-CCR5 antibodies are mentioned in US 2004-0043033, U.S. Pat.
No. 6,610,834, US 2003-0228306, US 2003-0195348, US 2003-0166870, US
2003-0166024, US 2003-0165988, US 2003-0152913, US 2003-0100058, US
2003-0099645, US 2003-0049251, US 2003-0044411, US 2003-0003440, U.S. Pat.
No. 6,528,625, US 2002-0147147, US 2002-0146415, US 2002-0106374, US
2002-0061834, US 2002-0048786, US 2001/0000241, EP 1 322 332, EP 1 263
791, EP 1 207 202, EP 1 161 456, EP 1 144 006, WO 2003/072766, WO
2003/066830, WO 2003/033666, WO 2002/083172, WO 02/22077, WO 01/58916, WO
01/58915, WO 01/43779, WO 01/42308, and WO 2006/103100. Especially
preferred anti-CCR5 antibodies are described in WO 2006/103100. An
especially preferred anti-CCR5 antibody is characterized in that the
antibody comprises a variable heavy chain domain consisting of an
immunoglobulin framework and a CDR3 region selected from the group
consisting of the heavy chain CDR3 sequences SEQ ID NO:16, 17. A further
preferred antibody comprises a variable heavy chain region consisting of
an immunoglobulin framework and a CDR3 region selected from the group
consisting of CDR3 sequences SEQ ID NO: 16, 17, a CDR2 region selected
from the group consisting of CDR2 sequences SEQ ID NO:13, 14, 15, and a
CDR1 region selected from the group consisting of CDR1 sequences SEQ ID
NO:9, 10, 11, 12. Preferred heavy chain variable domains are shown in SEQ
ID NO:1, 3, 5, 7. A preferred anti-CCR5 antibody comprises in addition a
variable light chain domain consisting of an immunoglobulin framework and
a CDR1 region selected from the group consisting of CDR1 sequences SEQ ID
NO:18, 19, 20, a CDR2 region selected from the group consisting of CDR2
sequences SEQ ID NO:21, 22, 23, and a CDR3 region selected from the group
of CDR3 sequences SEQ ID NO:24, 25. The anti-CCR5 antibody is preferably
characterized in containing as heavy chain CDRs the CDRs of SEQ ID NO: 1
and as light chain CDRs the CDRs of SEQ ID NO:2, as heavy chain CDRs the
CDRs of SEQ ID NO:3 and as light chain CDRs the CDRs of SEQ ID NO:4, as
heavy chain CDRs the CDRs of SEQ ID NO:5 and as light chain CDRs the CDRs
of SEQ ID NO:6, or as heavy chain CDRs the CDRs of SEQ ID NO:7 and as
light chain CDRs the CDRs of SEQ ID NO:8.
CDR sequences can be determined according to the standard definition of E.
A. Kabat et al., Sequences of Proteins of Immunological Interest, 5th ed.,
Public Health Service, National Institutes of Health, Bethesda, Md.
(1991). CDRs of SEQ ID NO: 1-8 are shown in SEQ ID NO:9-25.
The anti-CCR5 antibody comprises preferably a variable heavy and light
chain domain independently selected from the group consisting of a) the
heavy chain (V.sub.H) variable domain defined by amino acid sequence SEQ
ID NO: 1 and the light chain (V.sub.L) variable domain defined by SEQ ID
NO:2; b) the heavy chain variable domain defined by amino acid sequence
SEQ ID NO:3 and the light chain variable domain defined by SEQ ID NO:4; c)
the heavy chain variable domain defined by amino acid sequence SEQ ID NO:5
and the light chain variable domain defined by SEQ ID NO:6; d) the heavy
chain variable domain defined by amino acid sequence SEQ ID NO:7 and the
light chain variable domain defined by SEQ ID NO:8.
The antibody used in the conjugate according to the invention is
preferably characterized in that the constant domains are of human origin.
Such constant domains are well known in the state of the art and, e.g.,
described by Kabat (see e.g. G. Johnson and T. T. Wu, Nucleic Acids Res.
(2000) 28:214-18). For example, a useful human IgG1 heavy chain constant
region (C.sub.H1-Hinge-C.sub.H2-C.sub.H3) comprises an amino acid sequence
independently selected from the group consisting of SEQ ID NO:26, 27. For
example, a useful human kappa (.kappa.) light chain constant domain
comprises an amino acid sequence of a kappa light chain constant domain
(.kappa. light chain constant domain, C.sub.L) of SEQ ID NO:28. It is
further preferred that the antibody's variable domains are of mouse origin
and comprises the antibody variable domain sequence frame of a mouse
antibody according to Kabat (see e.g. G. Johnson and T. T. Wu, supra).
A preferred anti-CCR5 antibody shows a binding to the same epitope(s) of
CCR5 as does an antibody selected from the group consisting of the
antibodies A to E or is inhibited in binding to CCR5 by antibodies A to E
due to steric hindrance of binding or competitive binding. Epitope binding
is investigated by using alanine scanning according to the method
described by W. C. Olson et al. (J. Virol. (1999) 73:4145-55) for epitope
mapping. A signal reduction of 75% or more shows that the mutated amino
acid(s) contribute to the epitope recognized by said antibody. Binding of
the antibody to the same epitope is found, if the amino acids contributing
to the epitope are recognized by the investigated antibody and antibody A,
B, C, D, or E. Antibody C, which shows lower IC.sub.50 values than
antibody 2D7 in HIV assays, binds to an epitope including amino acids on
the ECL2 domain of CCR5 (B. Lee et al., J. Biol. Chem. (1999) 274:9617-26)
which is different from the epitope recognized by antibody 2D7 (2D7 binds
to amino acids K171 and E172 of ECL2A but not to ECL2B amino acids
184-189). Epitope binding for antibody C is found to be 20% for CCR5
mutant K171A or E172A (glu 172 is mutated to ala). 100% epitope binding is
defined for wild-type CCR5. A further preferred anti-CCR5 antibody binds
to the same epitope as antibody C binds.
The term "epitope" means a protein determinant capable of specific binding
to an antibody. Epitopes usually consist of chemically active surface
groupings of molecules such as amino acids or sugar side chains and
usually have specific three dimensional structural characteristics, as
well as specific charge characteristics. Conformational and
non-conformational epitopes are distinguished in that the binding to the
former but not the latter is lost in the presence of denaturing solvents.
Preferably an antibody according to the invention binds specifically to
native but not to denatured CCR5. Such an antibody comprises preferably
heavy chain CDR3 of SEQ ID NO: 17, and preferably in addition heavy chain
CDRs selected from the group of CDRs of SEQ ID NO:10, 11, 12, 14 and/or
15. Preferably such an antibody is antibody B, C, D, or E, or comprises
the variable domains of antibody B, C, D, or E. Preferably an antibody
binding to denatured CCR5 is antibody A or comprises the variable domains
of antibody A.
The term "variable domain" (variable domain of a light chain (V.sub.L),
variable domain of a heavy chain (V.sub.H)) as used herein denotes each
domain of the pair of light and heavy chain domains which is involved
directly in the binding of the antibody to the antigen. The variable
domains of the light and heavy chain have the same general structure, i.e.
they possess an "immunoglobulin framework", and each domain comprises four
"framework regions" (FR), whose sequences are widely conserved, connected
by three "hypervariable regions" (or "complementarity determining
regions", CDRs). The framework regions adopt a .beta.-sheet conformation
and the CDRs may form loops connecting the .beta.-sheet structure. The
CDRs in each chain are held in their three-dimensional structure by the
framework regions and form together with the CDRs from the other chain the
antigen binding site. The antibody heavy and light chain CDR3 regions play
a particularly important role in the binding specificity/affinity of the
antibodies according to the invention and therefore provide a further
object of the invention.
The terms "antigen-binding portion of an antibody" or "antigen-binding
site of an antibody" when used herein refer to the amino acid residues of
an antibody which are responsible for antigen-binding. The antigen-binding
site of an antibody comprises amino acid residues from the "complementarity
determining regions" or "CDRs". "Framework" or "FR" regions are those
variable domain regions other than the hypervariable region residues as
herein defined. Therefore, the light and heavy chain variable domains of
an antibody comprise from N- to C-terminus the regions FR1, CDR1, FR2,
CDR2, FR3, CDR3, and FR4 (immunoglobulin framework). Especially, the CDR3
region of the heavy chain is the region which contributes most to antigen
binding and defines the antibody. Preferably the antibody according to the
invention is characterized by comprising in its heavy chain variable
domain the CDR3 sequence of SEQ ID NO:16 or SEQ ID NO:17. Complementarity
determining (CDR) and framework (FR) regions are determined according to
the standard definition of E. A. Kabat et al., Sequences of Proteins of
Immunological Interest, 5th ed., Public Health Service, National
Institutes of Health, Bethesda, Md. (1991).
The "Fc part" of an anti-CCR5 antibody is not involved directly in binding
to CCR5, but exhibit various effector functions. Depending on the amino
acid sequence of the constant region of their heavy chains, antibodies or
immunoglobulins are divided in the classes: IgA, IgD, IgE, IgG, and IgM,
and several of these may be further divided into subclasses (isotypes),
e.g. IgG1, IgG2, IgG3, and IgG4, IgA1 and IgA2. According to the heavy
chain constant regions the different classes of immunoglobulins are called
.alpha., .delta., .epsilon., .gamma., and .mu., respectively. The
antibodies according to the invention are preferably of IgG type. An "Fc
part of an antibody" is a term well known to the skilled artisan and
defined on basis of papain cleavage of antibodies. The antibodies
according to the invention contain as Fc part a human Fc part or an Fc
part derived from human origin. In a further embodiment of the invention
the Fc part is either an Fc part of a human antibody of the subclass IgG4
or an Fc part of a human antibody of the subclass IgG1, IgG2, or IgG3,
which is modified in such a way that no Fc.gamma. receptor (e.g.
Fc.gamma.RIIIa) binding and/or no C1q binding as defined below can be
detected. Preferably the Fc part is a human Fc part and especially
preferred either from human IgG4 subclass or a mutated Fc part from human
IgG1 subclass. Further preferred are Fc parts from human IgG1 subclass
with mutations L234A and L235A. Further preferred are Fc parts shown in
SEQ ID NO: 26, SEQ ID NO: 27, SEQ ID NO: 26 with mutations L234A and
L235A, SEQ ID NO: 27 with mutation S228P. While IgG4 shows reduced
Fc.gamma. receptor (Fc.gamma.RIIIa) binding, antibodies of other IgG
subclasses show strong binding. However Pro238, Asp265, Asp270, Asn297
(loss of Fc carbohydrate), Pro329, Leu234, Leu235, Gly236, Gly237, Ile253,
Ser254, Lys288, Thr307, Gln311, Asn434, and His435 are residues which if
altered provide also reduced Fc.gamma. receptor binding (R. L. Shields et
al., J. Biol. Chem. (2001) 276:6591-604; J. Lund et al., FASEB J. (1995)
9:115-19; A. Morgan et al., Immunol. (1995) 86:319-24; EP 0 307 434).
Preferably an antibody according to the invention is in regard to Fc.gamma.
receptor binding of IgG4 subclass or of IgG1 or IgG2 subclass, with a
mutation in L234, L235, and/or D265, and/or contains the PVA236 mutation.
Preferred are the mutations S228P, L234A, L235A, L235E, and/or PVA236
(PVA236 means that the amino acid sequence ELLG (given in one letter amino
acid code) from amino acid position 233 to 236 of IgG1 or EFLG of IgG4 is
replaced by PVA). Especially preferred are the mutations S228P of IgG4,
and L234A and L235A of IgG1. The Fc part of an antibody is directly
involved in ADCC (antibody-dependent cell-mediated cytotoxicity) and CDC
(complement-dependent cytotoxicity). Complement activation (CDC) is
initiated by binding of complement factor C1q to the Fc part of most IgG
antibody subclasses. Binding of C1q to an antibody is caused by defined
protein-protein interactions at the so called binding site. Such Fc part
binding sites are known in the state of the art and described e.g. by T.
J. Lukas et al., J. Immunol. (1981) 127:2555-60; R. Brunhouse and J. J.
Cebra, Mol. Immunol. (1979) 16: 907-17; D. R. Burton et al., Nature (1980)
288:338-44; J. E. Thommesen et al., Mol. Immunol. (2000) 37:995-1004; E.
E. Idusogie et al., J. Immunol. (2000) 164:4178-84; M. Hezareh et al., J.
Virol. (2001) 75:12161-68; A. Morgan et al., Immunol. (1995) 86:319-24;
and EP 0 307 434. Such Fc part binding sites are, e.g., characterized by
the amino acids L234, L235, D270, N297, E318, K320, K322, P331, and P329
(numbering according to EU index of Kabat). Antibodies of subclass IgG1,
IgG2, and IgG3 usually show complement activation including C1q and C3
binding, whereas IgG4 does not activate the complement system and does not
bind C1q and C3. An anti-CCR5 antibody which does not bind Fc.gamma.
receptor and/or complement factor C1q does not elicit antibody-dependent
cellular cytotoxicity (ADCC) and/or complement dependent cytotoxicity
(CDC). Preferably, this antibody is characterized in that it binds CCR5,
contains an Fc part derived from human origin, and does not bind Fc.gamma.
receptors and/or complement factor C1q. More preferably, this antibody is
a human, or humanized, or a T-cell antigen depleted antibody. C1q binding
can be measured according to Idusogie, E. E., et al., J. Immunol. 164
(2000) 4178-4184. No "C1q binding" is found if in such an assay the
optical density (OD) at 492-405 nm is for the test antibody lower than 15%
of the value for human C1q binding of the unmodified wild-type antibody Fc
part at an antibody concentration of 8 .mu.g/ml. ADCC can be measured as
binding of the antibody to human Fc.gamma.RIIIa on human NK cells. Binding
is determined at an antibody concentration of 20 .mu.g/ml. "No Fc.gamma.
receptor binding" or "no ADCC" means a binding of up to 30% to human
Fc.gamma.RIIIa on human NK cells at an antibody concentration of 20 .mu.g/ml
compared to the binding of the same antibody as human IgG1 (SEQ ID NO:26).
An antibody used in a conjugate according to the invention include, in
addition, such antibodies having "conservative sequence modifications"
(variant antibodies), which are amino acid sequence modifications which do
not affect or alter the above-mentioned characteristics of the antibody
according to the invention. Modifications can be introduced by standard
techniques known in the art, such as site-directed mutagenesis and PCR-mediated
mutagenesis. Conservative amino acid substitutions include ones in which
the amino acid residue is replaced with an amino acid residue having a
similar side chain. Families of amino acid residues having similar side
chains have been defined in the art. These families include amino acids
with basic side chains (e.g. lysine, arginine, histidine), acidic side
chains (e.g. aspartic acid, glutamic acid), uncharged polar side chains
(e.g. glycine, asparagine, glutamine, serine, threonine, tyrosine,
cysteine, tryptophan), non-polar side chains (e.g. alanine, valine,
leucine, isoleucine, proline, phenylalanine, methionine), beta-branched
side chains (e.g. threonine, valine, isoleucine), and aromatic side chains
(e.g. tyrosine, phenylalanine, tryptophan, histidine). Thus, a predicted
nonessential amino acid residue in a human anti-CCR5 antibody can be
preferably replaced with another amino acid residue from the same side
chain family. A "variant" anti-CCR5 antibody, refers therefore herein to a
molecule which differs in amino acid sequence from a "parent" anti-CCR5
antibody's amino acid sequence by up to ten, preferably from about two to
about five, additions, deletions, and/or substitutions in one or more of
the variable domain regions of the parent antibody outside the heavy chain
CDR3 region. Each other heavy chain CDR region comprises at maximum one
single amino acid addition, deletion, and/or substitution. The invention
comprises a method of modifying the CDR amino acid sequence of a parent
antibody binding to CCR5, characterized in selecting a heavy chain
variable domain from the group of heavy chain variable domains consisting
of SEQ ID NO: 1, 3, 5, 7, and/or a light chain variable domain from the
group of light chain variable domains consisting of SEQ ID NO:2, 4, 6, 8,
providing a nucleic acid encoding said initial variable domain amino acid
sequence, modifying said nucleic acid in that one amino acid is modified
in heavy chain CDR1, one amino acid is modified in heavy chain CDR2, 1-3
amino acid are modified in light chain CDR1, 1-3 amino acids are modified
in light chain CDR2, and/or 1-3 amino acids are modified in light chain
CDR3, expressing and incorporating said modified variable domain(s) amino
acid sequence in an antibody structure, measuring whether said antibody
binds to CCR5 and selecting said modified variable domain(s)/CDR(s) if the
antibody binds to CCR5. Preferably such modifications are conservative
sequence modifications. Amino acid sequence modifications can be performed
by mutagenesis based on molecular modeling as described by L. Riechmann et
al., Nature (1988) 332:323-27, and C. Queen et al., Proc. Natl. Acad. Sci.
USA (1989) 86:10029-33.
The term "linker" or "peptidic linker" as used within this application
denotes peptide linkers of natural and/or synthetic origin. They are
building up of a linear amino acid chain wherein the 20 naturally
occurring amino acids are the monomeric building blocks. The chain has a
length of from 1 to 50 amino acids, preferred between 1 and 28 amino
acids, especially preferred between 3 and 25 amino acids. The linker may
contain repetitive amino acid sequences or sequences of naturally
occurring polypeptides, such as polypeptides with a hinge-function. The
linker has the function to ensure that a peptide conjugated to an
anti-CCR5 antibody can perform its biological activity by allowing the
peptide to fold correctly and to be presented properly. Preferably the
linker is a "synthetic peptidic linker" that is designated to be rich in
glycine, glutamine, and/or serine residues. These residues are arranged
e.g. in small repetitive units of up to five amino acids. This small
repetitive unit may be repeated for two to five times to form a multimeric
unit. At the amino- and/or carboxy-terminal ends of the multimeric unit up
to six additional arbitrary, naturally occurring amino acids may be added.
Other synthetic peptidic linkers are composed of a single amino acid, that
is repeated between 10 to 20 times. At each of the amino- and/or carboxy-terminal
end up to six additional arbitrary, naturally occurring amino acids may be
present. Preferred linkers are shown in Table 2 (see Original Patent).
Especially preferred are linkers [GQ.sub.4].sub.3GNN (SEQ ID NO:40),
LSLSPGK (SEQ ID NO:36), LSPNRGEC (SEQ ID NO:37), LSLSGG (SEQ ID NO:61),
LSLSPGG (SEQ ID NO:62). All peptidic linkers can be encoded by a nucleic
acid molecule and therefore can be recombinantly expressed. As the linkers
are themselves peptides, the antifusogenic peptide is connected to the
linker via a peptide bond that is formed between two amino acids. The
peptidic linker is introduced between the antifusogenic peptide and the
anti-CCR5 antibody chain to which the antifusogenic peptide is to be
conjugated. Therefore two or three, respectively, possible sequences (in
amino- to carboxy-terminal direction) exist: a) antifusogenic peptide-peptidic
linker-anti-CCR5 antibody polypeptide chain, or b) anti-CCR5 antibody
polypeptide chain-peptidic linker-antifusogenic peptide, or c)
antifusogenic peptide-peptidic linker-anti-CCR5 antibody polypeptide
chain-peptidic linker-antifusogenic peptide.
In one embodiment of the invention the conjugate is characterized in
comprising i) the heavy chain (V.sub.H) variable domain defined by amino
acid sequence SEQ ID NO:1 and the light chain (V.sub.L) variable domain
defined by SEQ ID NO:2; or the heavy chain variable domain defined by
amino acid sequence SEQ ID NO:3 and the light chain variable domain
defined by SEQ ID NO:4; or the heavy chain variable domain defined by
amino acid sequence SEQ ID NO:5 and the light chain variable domain
defined by SEQ ID NO:6; or the heavy chain variable domain defined by
amino acid sequence SEQ ID NO:7 and the light chain variable domain
defined by SEQ ID NO:8; ii) a linker selected from the group consisting of
the amino acids glycine (G) and asparagine (N), the tripeptide GST, and
SEQ ID NO:36-62; and iii) an antifusogenic peptide selected from the group
of peptides defined by SEQ ID NO:29 to 35.
A preferred conjugate of a heavy and/or light chain of mAb CCR5 and an
antifusogenic peptide(s) ("chain conjugate") is selected from the group
consisting of the conjugates (1) [antifusogenic peptide]-[linker].sub.m-[heavy
chain], (2) [heavy chain]-[linker].sub.m-[antifusogenic peptide], (3) [antifusogenic
peptide]-[linker].sub.m-[heavy chain]-[antifusogenic peptide], (4) [antifusogenic
peptide]-[linker].sub.m-[light chain], (5) [light chain]-[linker].sub.m-[antifusogenic
peptide], (6) [antifusogenic peptide]-[linker].sub.m-[light chain]-[antifusogenic
peptide], (7) [antifusogenic peptide]-[linker].sub.m-[heavy chain]-[linker].sub.m-[antifusogenic
peptide], (8) [antifusogenic peptide]-[linker].sub.m-[light chain]-[linker].sub.m-[antifusogenic
peptide], wherein the linker can be the same or different both within and
between said chain conjugates, wherein m is an integer of 1 or 0, and m
can be independently the same or different both within and between said
conjugates. For example in a conjugate comprising a chain conjugate (7)
and a mAb CCR5 light chain the two linkers in chain conjugate (7) can be
the same, i.e. have the same amino acid sequence and length, or can be
different, i.e. have different amino acid sequences and/or lengths, or one
or both can be absent. For example in a conjugate comprising chain
conjugates (2) and (4) the linker contained in chain conjugate (2) and the
linker contained in chain conjugate (4) can be the same, i.e. have the
same amino acid sequence and length, or can be different, i.e. have
different amino acid sequences and/or lengths, or one or both can be
absent. In the chain conjugates the linker(s) can be present (m=1) or
absent (m=0). Preferred chain conjugates are the chain conjugates (2),
(3), (4), and (7). One embodiment of the current invention is a conjugate
comprising 2.times.[mAb CCR5 light chain] and 2.times. chain conjugate
(2). This conjugate comprises two not conjugate anti-CCR5 antibody light
chains and two anti-CCR5 antibody heavy chains conjugated via the
C-terminus to the N-terminus of an antifusogenic peptide, optionally with
an intermediate linker. Another embodiment of the current invention is a
conjugate comprising two mAb CCR5 light chains and two chain conjugates
(3). Still another embodiment is a conjugate comprising two mAb CCR5 heavy
chains and two chain conjugates (4). A further embodiment of the current
invention is a conjugate comprising two mAb CCR5 light chains and two
chain conjugates (7). The heavy and/or light chain comprises preferably a
constant region (Fc).
The invention further provides a method for the manufacture of a
pharmaceutical composition comprising an effective amount of a conjugate
according to the invention together with a pharmaceutically acceptable
carrier and the use of the conjugate according to the invention for such a
method.
The invention further provides the use of a conjugate according to the
invention in an effective amount for the manufacture of a pharmaceutical
agent, preferably together with a pharmaceutically acceptable carrier, for
the treatment of a patient suffering from AIDS.
The term "amino acid" as used within this application denotes the group of
naturally occurring carboxy .alpha.-amino acids comprising alanine (three
letter code: ala, one letter code: A), arginine (arg, R), asparagine (asn,
N), aspartic acid (asp, D), cysteine (cys, C), glutamine (gln, Q),
glutamic acid (glu, E), glycine (gly, G), histidine (his, H), isoleucine (ile,
I), leucine (leu, L), lysine (lys, K), methionine (met, M), phenylalanine
(phe, F), proline (pro, P), serine (ser, S), threonine (thr, T),
tryptophan (trp, W), tyrosine (tyr, Y), and valine (val, V).
Methods and techniques known to a person skilled in the art, which are
useful for carrying out the current invention, are described e.g. in F. M.
Ausubel, ed., Current Protocols in Molecular Biology, Volumes I to III
(1997), Wiley and Sons; Sambrook et al., Molecular Cloning: A Laboratory
Manual, Second Edition, Cold Spring Harbor Laboratory Press, Cold Spring
Harbor, N.Y. (1989).
In the conjugates according to the invention the carboxy-terminal amino
acid of an anti-CCR5 antibody chain is conjugated via a peptide bond to
the amino-terminal amino acid of the antifusogenic peptide or the carboxy-terminal
amino acid of the antifusogenic peptide is conjugated via a peptide bond
to the amino-terminal amino acid of an anti-CCR5 antibody chain. In one
embodiment an intermediate linker is present between the antifusogenic
peptide and the anti-CCR5 antibody chain. Thus, the conjugate according to
the invention is characterized by the general formula mAb CCR5-[linker].sub.m-[antifusogenic
peptide].sub.n wherein m is independently for each antifusogenic peptide
either 0 (i.e. a direct peptide bond between mAb CCR5 and the
antifusogenic peptide) or 1 (i.e. a linker is present between mAb CCR5 and
antifusogenic peptide) and n is an integer of from 1 to 8. In one
embodiment n is an integer of from 2 to 8. In another embodiment n is an
integer of from 2 to 4. In another embodiment n is an integer of 2 or 4.
One embodiment of the invention comprises a conjugate characterized in
comprising an antifusogenic peptide at each C-terminus of the heavy chains
or at each N-terminus of the light chains of the anti-CCR5 antibody. In
this embodiment two antifusogenic peptides are conjugated to one anti-CCR5
antibody. In an other embodiment is the conjugate characterized by
comprising an antifusogenic peptide at each C-terminus of the heavy chains
and at each N-terminus of the light chains. In this embodiment four
antifusogenic peptides are conjugated to one anti-CCR5 antibody.
The antifusogenic peptide which is introduced at a terminus of a mAb CCR5
heavy and/or light chain(s) is small of size compared to the mAb CCR5. For
example, the smallest immunoglobulins, immunoglobulins of class G, have a
molecular weight of approximately 150 kDa; an antifusogenic peptide has
preferably a size (molecular weight) of less than 12.5 kDa, which is
equivalent to about 100 amino acids, in general less than 7.5 kDa, which
is equivalent to about 60 amino acids. The antifusogenic peptide has an
amino acid sequence of from 5 to 100 amino acid residues, preferably of
from 10 to 75 amino acid residues, more preferably of from 15 to 50 amino
acid residues. The conjugates of the current invention are useful for
pharmaceutical, therapeutical, or diagnostical applications. The number of
antifusogenic peptides, which can be conjugated to mAb CCR5 heavy and/or
light chain(s), is from one to the combined number of amino- and carboxy-termini
of the anti-CCR5 antibody polypeptide chains. As the current invention
encompasses different anti-CCR5 antibodies the number of antifusogenic
peptides can vary. In case of an anti-CCR5 antibody comprising two heavy
and two light chains the combined number of amino-termini (N-termini) and
carboxy-termini (C-termini) is eight, which is at the same time the
totaling maximum number of conjugated antifusogenic peptides; in case e.g.
of an anti-CCR5 antibody fragment such as a single chain antibody (scFv)
the combined number of termini and therefore the maximum number of
conjugatable antifusogenic peptides is two. If a single antifusogenic
peptide is conjugated to mAb CCR5, the peptide can occupy any one of the
termini of the anti-CCR5 antibody chains. Likewise, if the maximum
possible number of peptides is conjugated to mAb CCR5, all termini are
occupied by a single peptide. If the number of peptides, which are
conjugated to mAb CCR5, is smaller than the maximum possible number,
different distributions of the peptides at the termini of the anti-CCR5
antibody chains are possible. For example, if four peptides are conjugated
to an immunoglobulin of the G or E class, five different combinations are
possible (see Table 1 (see Original Patent)). In two combinations all
termini of one kind, i.e. all four amino-termini or all four carboxy-termini
of the anti-CCR5 antibody chains, are each conjugated to one single
antifusogenic peptide. The other termini are not conjugated. This results
in one embodiment in an allocation of the modifications/conjugations in
one area of the anti-CCR5 antibody. In the other cases the polypeptides
are conjugated to a number of both termini. Within these combinations the
conjugated peptides are allocated to different areas of the anti-CCR5
antibody. In either case the sum of conjugated termini is four.
The current invention preferably comprises conjugates in which at least
two of the termini are conjugated to an antifusogenic peptide. The amino
acid sequences of the antifusogenic peptides can be different, similar or
identical. In one embodiment the amino acid sequence identity is in the
range of from 90% to less than 100%; these amino acid sequences and the
corresponding peptides are defined as similar. In a preferred embodiment
the antifusogenic peptides are identical, i.e. have an amino acid identity
of 100%.
The present invention comprises a conjugate comprising one or more
antifusogenic peptides and an anti-CCR5 antibody (mAb CCR5) wherein one to
eight antifusogenic peptides are each conjugated to one terminus of the
heavy and/or light chains of said anti-CCR5 antibody via a peptide bond.
In one embodiment the conjugate according to the invention comprises at
least two antifusogenic peptides and an anti-CCR5 antibody wherein two to
eight antifusogenic peptides are each conjugated to one terminus of the
heavy and/or light chains of said anti-CCR5 antibody.
In one embodiment the conjugate according to the invention is
characterized i) in comprising two light chain variable domains of SEQ ID
NO:2, two chain conjugates of type (2) each comprising a heavy chain
variable domain of SEQ ID NO: 1, a linker of SEQ ID NO:40 and an
antifusogenic peptide of SEQ ID NO:33, ii) in comprising two light chain
variable domains of SEQ ID NO:4, two chain conjugates of type (2) each
comprising a heavy chain variable domain of SEQ ID NO:3, a linker of SEQ
ID NO:40 and an antifusogenic peptide of SEQ ID NO:33, iii) in comprising
two light chain variable domains of SEQ ID NO:6, two chain conjugates of
type (2) each comprising a heavy chain variable domain of SEQ ID NO:5, a
linker of SEQ ID NO:40 and an antifusogenic peptide of SEQ ID NO:33, or
iv) in comprising two light chain variable domains of SEQ ID NO:8, two
chain conjugates of type (2) each comprising a heavy chain variable domain
of SEQ ID NO:7, a linker of SEQ ID NO:40 and an antifusogenic peptide of
SEQ ID NO:33.
The conjugation between the antifusogenic peptide and the anti-CCR5
antibody is performed on the nucleic acid level. Therefore a peptide bond
is formed between the antifusogenic peptide and the anti-CCR5 antibody
chain with or without an intermediate linker. Thus either the carboxy-terminal
amino acid of the antifusogenic peptide is conjugated to the
amino-terminal amino acid of an anti-CCR5 antibody chain with or without
an intermediate linker, or a carboxy-terminal amino acid of the anti-CCR5
antibody chain is conjugated to the amino-terminal amino acid of the
antifusogenic peptide with or without an intermediate linker or both
termini of the anti-CCR5 antibody chain are conjugated to an antifusogenic
peptide each with or without an intermediate linker. For the recombinant
production of the antifusogenic peptide-anti-CCR5 antibody-conjugate
according to the invention one or more nucleic acid molecules encoding
different polypeptides are required, preferably two to eight nucleic acid
molecules are employed. These nucleic acid molecules encode the different
anti-CCR5 antibody polypeptide chains of the conjugate and are in the
following referred to as structural genes. They can be located on the same
expression plasmid (vector) or can alternatively be located on different
expression plasmids (vectors). The assembly of the conjugate takes
preferably place before secretion of the conjugate and thus within the
expressing cells. Therefore the nucleic acid molecules encoding the
polypeptide chains of the conjugate are preferably expressed in the same
host cell. If after recombinant expression a mixture of conjugates is
obtained, the conjugates can be separated and purified by methods known to
a person skilled in the art. These methods are well established and
widespread used for immunoglobulin purification and are employed either
alone or in combination. Such methods are, for example, affinity
chromatography using microbial-derived proteins (e.g. protein A or protein
G affinity chromatography), ion exchange chromatography (e.g. cation
exchange (carboxymethyl resins), anion exchange (amino ethyl resins) and
mixed-mode exchange chromatography), thiophilic adsorption (e.g. with
beta-mercaptoethanol and other SH ligands), hydrophobic interaction or
aromatic adsorption chromatography (e.g. with phenyl-sepharose,
aza-arenophilic resins, or m-aminophenylboronic acid), metal chelate
affinity chromatography (e.g. with Ni(II)- and Cu(II)-affinity material),
size exclusion chromatography, and preparative electrophoretic methods
(such as gel electrophoresis, capillary electrophoresis) (M. A.
Vijayalakshmi, Appl. Biochem. Biotech. (1998) 75:93-102). With recombinant
engineering methods known to a person skilled in the art the conjugates
can be tailor-made on the nucleic acid/gene level. The nucleic acid
sequences encoding immuno-globulins are known and can be obtained for
example from genomic databases. Likewise the nucleic acid sequences
encoding antifusogenic peptides are known or can easily be deduced from
their amino acid sequence. The elements required for the construction of
an expression plasmid for the expression of the conjugate of the current
invention are, for example, an expression cassette for the anti-CCR5
antibody light chain in its natural and/or modified and/or conjugated
version, an expression cassette for the anti-CCR5 antibody heavy chain in
its natural and/or modified and/or conjugated version (alternatively the
anti-CCR5 antibody light chain and the anti-CCR5 antibody heavy chain can
be contained in the same expression cassette, e.g. as bicistronic
expression element), a selection marker, and an E. coli replication as
well as selection unit. These expression cassettes comprise a promoter, a
DNA segment encoding a secretion signal sequence, the structural gene, and
a terminator/polyadenylation signal. The elements are assembled in an
operatively linked form either on one plasmid encoding all chains of the
conjugate, or on two or more plasmids each encoding one or more chains of
the conjugate. For the expression of the encoded polypeptides the
plasmid(s) is (are) introduced into a suitable host cell. Proteins are
preferably produced in mammalian cells such as CHO cells, NS0 cells, Sp2/0
cells, COS cells, HEK cells, K562 cells, BHK cells, PER.C6.RTM. cells, and
the like. The regulatory elements of the plasmid have to be selected in a
way that they are functional in the selected host cell. For the expression
the host cell containing the plasmid encoding one or more chains of the
conjugate is cultivated under conditions suitable for the expression of
the chains. The expressed conjugate chains are functionally assembled. The
fully processed antifusogenic peptide-anti-CCR5 antibody-conjugate is
secreted into the medium.
An "expression plasmid" is a nucleic acid encoding a polypeptide to be
expressed in a host cell. Typically, an expression plasmid comprises a
prokaryotic plasmid propagation unit, e.g. for E. coli, comprising an
origin of replication, and a resistance gene, an eukaryotic selection
marker, and one or more expression cassettes for the expression of the
structural gene(s) of interest comprising a promoter, a structural gene,
and a transcription terminator including a polyadenylation signal. Gene
expression is usually placed under the control of a promoter, and such a
structural gene is said to be "operably linked to" the promoter.
Similarly, a regulatory element and a core promoter are operably linked if
the regulatory element modulates the activity of the core promoter.
One aspect of the current invention is thus a method for the production of
a conjugate according to the invention, comprising the following steps a)
cultivating a cell containing one or more expression plasmids each
comprising one or more nucleic acid molecules encoding a conjugate
according to the invention under conditions suitable for the expression of
the conjugate, b) recovering the conjugate from the cell or the
supernatant.
The term "under conditions suitable for the expression of the conjugate"
denotes conditions which are used for the cultivation of a cell expressing
a polypeptide and which are known to or can easily be determined by a
person skilled in the art. It is known to a person skilled in the art that
these conditions may vary depending on the type of cell cultivated and
type of polypeptide expressed. In general the cell is cultivated at a
temperature, e.g. between 20.degree. C. and 40.degree. C., and for a
period of time sufficient to allow effective production of the polypeptide
conjugate, e.g. for 4 to 28 days.
As used herein, "pharmaceutically acceptable carrier" includes any and all
solvents, dispersion media, coatings, antibacterial and antifungal agents,
isotonic and absorption/resorption delaying agents, and the like that are
physiologically compatible. Preferably, the carrier is suitable for
injection or infusion. Pharmaceutically acceptable carriers include
sterile aqueous solutions or dispersions and sterile powders for the
preparation of sterile injectable solutions or dispersion. The use of such
media and agents for pharmaceutically active substances is known in the
art. In addition to water, the carrier can be, for example, an isotonic
buffered saline solution.
Regardless of the route of administration selected, the compounds of the
present invention, which may be used in a suitable hydrated form, and/or
the pharmaceutical compositions of the present invention, are formulated
into pharmaceutically acceptable dosage forms by conventional methods
known to those of skilled in the art.
Actual dosage levels of the active ingredients in the pharmaceutical
compositions of the present invention may be varied so as to obtain an
amount of the active ingredient, which is effective to achieve the desired
therapeutic response for a particular patient, composition, and mode of
administration, without being toxic to the patient. The selected dosage
level will depend upon a variety of pharmacokinetic factors including the
activity of the particular compositions of the present invention employed,
the route of administration, the time of administration, the rate of
excretion of the particular compound being employed, other drugs,
compounds and/or materials used in combination with the particular
compositions employed, the age, sex, weight, condition, general health and
prior medical history of the patient being treated, and like factors well
known in the medical arts.
The invention preferably comprises the use of a conjugate according to the
invention for the treatment of a patient suffering from immunodeficiency
syndromes such as AIDS.
Claim 1 of 5 Claims
1. A conjugate comprising an anti-CCR5
antibody (mAb CCR5) comprising two heavy chains and two light chains,
having termini comprising an N-terminus and a C-terminus, wherein two or
four of said N-terminus or said C-terminus are conjugated with an
antifusogenic peptide; wherein said anti-CCR5 antibody comprises a
variable heavy chain domain and a variable light chain domain, wherein
said variable heavy chain domain consists of an immunoglobulin framework
and a CDR3 region selected from the group consisting of heavy chain CDR3
sequences SEQ ID NOS:16 and 17; a CDR2 region selected from the group
consisting of heavy chain CDR2 sequences SEQ ID NOS:13, 14, and 15; and a
CDR1 region selected from the group consisting of heavy chain CDR1
sequences SEQ ID NOS:9, 10, 11, and 12; and wherein said variable light
chain domain consists of an immunoglobulin framework and a CDR1 region
selected from SEQ ID NOS:18, 19, and 20; a CDR2 region selected from SEQ
ID NOS:21, 22, and 23; and a CDR3 region selected from SEQ ID NOS:24 and
25. ____________________________________________
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